Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1334 ATGGGTTCATATACCCCAAAGAATATCCTCATTACTGGGGCAGCTGGATTTATTGCATCTCATGTTGCGAACCGACTTGTCCGGAGCTACCCTGACTACAAAATTGTTGTCCTTGACAAGCTTGATTACTGCTCAAATTTGAAGAATCTCATTCCTTCAAAATCATCACCCAACTTCAAGTTTGTGAAGGGAGATATTGGTAGTGCTGATCTTGTCAACTACCTTCTCATCACCGAGTCCATCGACACTATAATGCACTTTGCTGCACAAACTCATGTTGACAACTCATTTGGTAATAGCTTTGAGTTCACCAAGAACAACATATATGGTACTCATGTGCTGTTAGAAGCCTGCAAAGTAACTGGCCAGATCAGGAGGTTCATTCATGTGAGCACTGATGAGGTATATGGGGAGACTGATGAGGATGCTGTTGTCGGAAACCATGAGGCTTCTCAACTTCTTCCCACAAACCCGTACTCTGCGACGAAAGCTGGGGCAGAAATGCTTGTCATGGCATATGGTAGGTCATATGGTTTACCAGTTATCACGACTCGTGGAAACAATGTTTACGGCCCCAATCAGTTTCCTGAGAAGTTAATTCCGAAGTTTATCCTCCTGGCTATGCAAGGAAAGAATCTTCCGATTCATGGGGATGGTTCTAATGTGAGGAGTTATTTATATTGTGAAGATGTTGCAGAGGCATTTGAACTTATCCTTCACAAGGGAGAGGTTGGCCATGTTTACAATATTGGGACAAAGAAGGAAAGGAGAGTTATTGATGTGGCCAAAGATATATGCACACTATTCAAAAAGGATCCAGAAGCTAGCATAAAATTTGTAGAGAACAGACCGTTCAATGATCAGAGATACTTTCTCGATGATCAAAAGCTAAAGATCTTGGGTTGGTCTGAGAAGACCACTTGGGAAGAAGGCTTGAAGAAAACCATGGATTGGTATACACAGAATCCTGATTGGTGGGGTGATGTAACCGGAGCACTGATTCCTCATCCGAGGATGCTGATGATGCCTGGTGGCTTGGAGAGACACTTTGAAGGATCTGAAGATGAAAAATCTGCATCCTTTGGCTCAACTAATACCCGGATGGTGGTTCCATCAACCAAGAACACTGGCACTCAGCAGAAACCCCCTTTTAAGTTCTTGCTCTATGGTAGAACTGGGTGGATTGGGGGTTTGCTGGGAAAGTTGTGTGAAAAGCAAGGGATTCCATATGAATATGGAAAAGGGCGCCTGGAGGATCGTAACTCACTTATCGCCGATCTTCAGCATGTGAAGCCAACCCATGTTTTTAATGCTGCAGGAGTAACGGGCAGACCCAATGTTGATTGGTGCGAATCTCATAAAACAGAAACCATCCGCACCAATGTTGCCGGTACTCTAACATTGGCTGATGTCTGCCGAGAGCAAGGGATCTTGATGATAAATTTCGCCACTGGTTGCATATTTGAGTATGATGCAGCACATCCAGAGGGATCTGGAATTGGTTATAAAGAGGAAGACAAGCCCAACTTCATTGGCTCTTTCTATTCCAAAACTAAAGCTATGGTTGAGGAGCTCTTGAGAGAATATGACAACGTGTGCACCCTTAGGGTTCGCATGCCGATTTCATCCGACTTGAGCAACCCACGCAACTTCATTACAAAGATTTCCCGTTATAACAAGGTCGTTAACATCCCGAACAGCATGACTATTTTGGATGAACTTCTACCTATTTCAATCGAAATGGCAAAGAGGAACTTGAAGGGCATCTGGAACTTCACAAATCCCGGGGTTGTGAGCCATAATGAGATCCTCGAGATGTACCGGGATTACATTGACCCTAACTTCAAGTGGACTAACTTCACACTTGAAGAGCAAGCCAAAGTTATAGTTGCTCCTAGAAGCAATAATGAGATGGATGGATCCAAATTGAAGAAAGAGTTCCCAGAATTGCTTTCCATCAAGGAATCACTTATCAAGTTTGTCTTTGAGCCAAACAAGAAATAA 2004 0.4341 MGSYTPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLIPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKNLPIHGDGSNVRSYLYCEDVAEAFELILHKGEVGHVYNIGTKKERRVIDVAKDICTLFKKDPEASIKFVENRPFNDQRYFLDDQKLKILGWSEKTTWEEGLKKTMDWYTQNPDWWGDVTGALIPHPRMLMMPGGLERHFEGSEDEKSASFGSTNTRMVVPSTKNTGTQQKPPFKFLLYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRNSLIADLQHVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREQGILMINFATGCIFEYDAAHPEGSGIGYKEEDKPNFIGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYIDPNFKWTNFTLEEQAKVIVAPRSNNEMDGSKLKKEFPELLSIKESLIKFVFEPNKK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1334 667 Gene3D - 9 313 - -
Lan8g1334 667 PANTHER UDP-GLUCOSE 4,6-DEHYDRATASE 1 666 - -
Lan8g1334 667 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 666 - -
Lan8g1334 667 MobiDBLite consensus disorder prediction 357 377 - -
Lan8g1334 667 CDD dTDP_HR_like_SDR_e 385 657 - -
Lan8g1334 667 Gene3D - 200 322 - -
Lan8g1334 667 TIGRFAM dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 8 328 IPR005888 GO:0008460|GO:0009225
Lan8g1334 667 CDD dTDP_GD_SDR_e 7 324 IPR005888 GO:0008460|GO:0009225
Lan8g1334 667 Pfam RmlD substrate binding domain 385 555 IPR029903 -
Lan8g1334 667 Gene3D - 374 667 - -
Lan8g1334 667 Pfam GDP-mannose 4,6 dehydratase 10 315 IPR016040 -
Lan8g1334 667 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 333 IPR036291 -
Lan8g1334 667 MobiDBLite consensus disorder prediction 356 377 - -
Lan8g1334 667 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 383 660 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1334 Lan-Chr8 20204442 20207339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1334 8 319 Miscellaneous Gene Families AT4G00110 26.946 4.66e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1334 K12450 - gmx:100785885 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1334 8 20204442 20207339 Lan8g1334 8 20204442 20207339 ECH