Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1331 ATGCCTAGAGTGGTTGTTCTTTTTCTTATGCTCTTATCTATCTCATCAGGATGGATTCTGATTATGGTTAATGGACAGAGAACTTGGTGTGTAGCTAAGCCTTCAACAGAGCAAGCTACCCTTTTGGTTAACATCAACTATGCCTGCTCTCAAGTTGATTGCCAGATCCTGCAGAAGGGCTGCCCCTGCTTTGCCCCGGACAATCTCTATAACCACGCCTCGGTAGCGATGAATCTCTATTATCAGTCTCATGGAAGAAACCACTGGAATTGTGATTTCAAGGGCTCTGGCATTGTAGTAGTGAGTGATCCTAGTTATGGTAGCTGCATTTACCCCTAG 339 0.4484 MPRVVVLFLMLLSISSGWILIMVNGQRTWCVAKPSTEQATLLVNINYACSQVDCQILQKGCPCFAPDNLYNHASVAMNLYYQSHGRNHWNCDFKGSGIVVVSDPSYGSCIYP* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1331 112 Pfam X8 domain 28 97 IPR012946 -
Lan8g1331 112 SMART X8_cls 28 111 IPR012946 -
Lan8g1331 112 PANTHER BETA-1,3 GLUCANASE 5 112 IPR044788 -
Lan8g1331 112 PANTHER MAJOR POLLEN ALLERGEN OLE E 10-LIKE 5 112 - -
Lan8g1331 112 Gene3D - 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1331 Lan-Chr8 20174589 20176125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1331 29 111 Glycoside Hydrolase AT3G55430 46.429 2.21e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1331 - - gmx:100784427 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1331 8 20174589 20176125 Lan8g1331 8 20174589 20176125 ECH