Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1031 ATGAAGAATAGAGCATCTAGAGTTTTGAAGGTGTTCATAGCTGATCTCAGATCCATGGCTAAGTCAAAAACTTTGGCTCTCAAGTCCAGAACAAATGCCATTAGAACAAGGTTGATTATTTTATCACTTGTGATGAACAAGAAGTTTGTAATAAGCTCTATTTCTCACAAGTTCCAATCTGTTCTGGGTCACCATCCTAACCCTAAGGAAGAATGCTTATTGGAAGATAGCAGTGACAAAAACAATGCCATGATGGTGTTCAATGACAACAACGACAATAACACTGTGTCAAATCCTAGTGAGACCCAAGTGGTGGAAGAGGACAAAGATCAAGATGGCTATGAAAGTTACTACAAGTATGAAGAAGATTATGACTATGATGATGAAGGTGGTGATGATAAGTGCATGTATCTGGATTTAACACACACAGTGTTTGACAAAGAGAATTTGGATCTTGGAGGTTCTGTGATTGAGTTGGTGAAGAGTTCAAAGGAGGAGTCTGGGAAAGAGTTCAAAATGGAGGAAGAAATTGACCATATGGCTGATCTTTTTATCAAGAAATTCCACAGGCAAATCATGTTGCAGAAGCAAAATTCTTTGAAGAGGTGCAAGGGAATGTGTTGA 624 0.3846 MKNRASRVLKVFIADLRSMAKSKTLALKSRTNAIRTRLIILSLVMNKKFVISSISHKFQSVLGHHPNPKEECLLEDSSDKNNAMMVFNDNNDNNTVSNPSETQVVEEDKDQDGYESYYKYEEDYDYDDEGGDDKCMYLDLTHTVFDKENLDLGGSVIELVKSSKEESGKEFKMEEEIDHMADLFIKKFHRQIMLQKQNSLKRCKGMC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1031 207 Pfam Cotton fibre expressed protein 174 206 IPR008480 -
Lan8g1031 207 PANTHER COTTON FIBER PROTEIN 1 206 - -
Lan8g1031 207 PANTHER EMB|CAB67623.1-RELATED 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1031 Lan-Chr8 12333835 12334811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1031 - - ccaj:109791419 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0698 10 7385685 7387103 Lan8g1031 8 12333835 12334811 PCT
Lan8g1031 8 12333835 12334811 Lan10g0698 10 7385685 7387103 PCT