Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0677 ATGGGTGCTTCACAATCAGTTTCAGAAAAATCTATCCATGAATTCTTGGTGAAGGATGCTAGAGGAAAAGAAGTGAGCCTCAACACCTTCAGGGGGAAAGTTGTTCTTGTAGTTAATGTTGCTTCAAAATGTGGATTTGCTGATGCTAACTACACCCAATTAACTCAGCTTTACAGCACATACAAGGACAAAGGTTTGGAGATATTGGCATTTCCATGCAACCAATTTTTGAAAAAAGAACCAGGGACTAGTCAGGAAGCACAAGACTTTGCCTGCACAAGATATAAGGCTGAATATCCCATTTTTGAGAAGATACGTGTGAATGGACCAGAAACAGCACCTATATACACATTCCTCAAAGCACAGAAATCTGGAATATTGGGTTCTAGGATAAAGTGGAATTTCACTAAGTTTTTGGTTGATGAGGAAGGGCATGTTATCCAGCGTTATAGCCCAACCACTGAACCATTGTCAATTGAGAATGATATTAAGAAAGCGTTAGGGGTGGCCTGA 513 0.4016 MGASQSVSEKSIHEFLVKDARGKEVSLNTFRGKVVLVVNVASKCGFADANYTQLTQLYSTYKDKGLEILAFPCNQFLKKEPGTSQEAQDFACTRYKAEYPIFEKIRVNGPETAPIYTFLKAQKSGILGSRIKWNFTKFLVDEEGHVIQRYSPTTEPLSIENDIKKALGVA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0677 170 PANTHER GLUTATHIONE PEROXIDASE 1 170 - -
Lan8g0677 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Lan8g0677 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Lan8g0677 170 PANTHER GLUTATHIONE PEROXIDASE 1 170 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 SUPERFAMILY Thioredoxin-like 10 167 IPR036249 -
Lan8g0677 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Lan8g0677 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Lan8g0677 170 Gene3D Glutaredoxin 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0677 Lan-Chr8 8964441 8966464 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0677 - K00432 gmx:100527283 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1270 5 26349086 26351159 Lan8g0677 8 8964441 8966464 PCT
Lan8g0677 8 8964441 8966464 Lan5g1270 5 26349086 26351159 PCT