Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0410 ATGGAGCAAAAAGCTGAAAACCTTGACGTTATCATAAGCAATAATCCAAATGCAATCGTTGTTAACCCTCCAAATCACTATAATATTGAATCATCCCTTAAGAAAAAGAAGCATGGCAACAAGAACATTTTCAAGGTGGCACTCTTCATGATGCGGGGTAGTCACAAAAAATCAAAATTGCTCCTTAAGGATGATGGTTCTAGAAGCATATGGAGGAAGCTGGTAGGATCCATGAGGCCATTGCACCTACAAAACAACCAATCTCCAATTCAAACTCCTAAAGCCAAAGCCATTATAGCCTTGCCCTATGAGAATAATACTAGTAATCTTGATATTCATCAGAGCGAGGTGGATGGATTTGATTCAGCTTCGGAGTTTGCGAATTCTCCATCTCCAGCGAGTAGCCGCTACGCTTCTGCCGTAGGGCTAAATGAAATGGTTCAGGATGAGGAAAACCATAAGGAGGAGGATAAGGAAGAAGAGAATGTTATGGAGGAAGATGATGGTAATGGAGATGAGATGATTGATGCTAAGGCTGAAGAGTTTATTGCTCAGTTTTACAGAGATATGAAGTTGCAAAGCTTGGACATTGTAGATCGTCGATTCATGGAGATAAGTATGAGGTCATTAGGGTTATAA 639 0.4038 MEQKAENLDVIISNNPNAIVVNPPNHYNIESSLKKKKHGNKNIFKVALFMMRGSHKKSKLLLKDDGSRSIWRKLVGSMRPLHLQNNQSPIQTPKAKAIIALPYENNTSNLDIHQSEVDGFDSASEFANSPSPASSRYASAVGLNEMVQDEENHKEEDKEEENVMEEDDGNGDEMIDAKAEEFIAQFYRDMKLQSLDIVDRRFMEISMRSLGL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0410 212 PANTHER COTTON FIBER PROTEIN 1 206 - -
Lan8g0410 212 PANTHER COTTON FIBER PROTEIN 1 206 - -
Lan8g0410 212 MobiDBLite consensus disorder prediction 149 171 - -
Lan8g0410 212 Coils Coil 147 167 - -
Lan8g0410 212 Pfam Cotton fibre expressed protein 172 204 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0410 Lan-Chr8 6314850 6316096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0410 - - gmx:100800206 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0410 8 6314850 6316096 Lan20g0525 20 3922301 3923571 LSH
Lan4g0954 4 12059694 12060635 Lan8g0410 8 6314850 6316096 PCT
Lan8g0410 8 6314850 6316096 Lan4g0954 4 12059694 12060635 PCT