Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0325 ATGCAAACCGCATTGACAACAATGGCATCCCACACTCTTCTCTCTCCTTTCCCTAATCAACTTCTCAAATCTTCCTTCTCAGGTCTTTCCTTCAAGCTATCTCCCCAATCCATAACCCTCTCTGCCACCACCGCCGCCGCCTCCAAGCCCCTTACTGTTGTCGCCGCCGCTAAGAAAGCTGTCGCCGTCCTCAAAGGAACCTCCGCCGTCGAAGGCGTCGTCACTCTCACCCAAGAAGATGGTGGCCCGACAACAGTTAATGTTCGTATTAGTGGTCTTGCTCCGGGACTTCATGGTTTTCACTTGCATGAGTATGGTGATACCACCAATGGCTGTATATCAACAGGACCACATTTTAATCCCAGTAAGCTAACACATGGTGCTCCTGAGGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCAGATGGGGTTGCAGAGGCAACAATTGTGGATAACCAGATACCACTCACTGGCCCCAATTCAGTAGTTGGAAGAGCCTTAGTGGTTCATGAGCTTCAGGATGACCTTGGAAAGGGTGGCCATGAACTTAGTTTGACCACTGGAAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGTATGA 630 0.4984 MQTALTTMASHTLLSPFPNQLLKSSFSGLSFKLSPQSITLSATTAAASKPLTVVAAAKKAVAVLKGTSAVEGVVTLTQEDGGPTTVNVRISGLAPGLHGFHLHEYGDTTNGCISTGPHFNPSKLTHGAPEDEVRHAGDLGNIVANADGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLTTGNAGGRLACGVVGLTPV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0325 209 CDD Cu-Zn_Superoxide_Dismutase 66 201 IPR001424 GO:0006801|GO:0046872
Lan7g0325 209 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 56 207 IPR024134 -
Lan7g0325 209 Pfam Copper/zinc superoxide dismutase (SODC) 70 204 IPR001424 GO:0006801|GO:0046872
Lan7g0325 209 Gene3D Superoxide dismutase, copper/zinc binding domain 54 208 IPR036423 GO:0006801|GO:0046872
Lan7g0325 209 PRINTS Cu-Zn-superoxide dismutase family signature 99 121 IPR001424 GO:0006801|GO:0046872
Lan7g0325 209 PRINTS Cu-Zn-superoxide dismutase family signature 135 144 IPR001424 GO:0006801|GO:0046872
Lan7g0325 209 PRINTS Cu-Zn-superoxide dismutase family signature 154 176 IPR001424 GO:0006801|GO:0046872
Lan7g0325 209 PRINTS Cu-Zn-superoxide dismutase family signature 179 205 IPR001424 GO:0006801|GO:0046872
Lan7g0325 209 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 193 204 IPR018152 -
Lan7g0325 209 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 1 56 207 - -
Lan7g0325 209 SUPERFAMILY Cu,Zn superoxide dismutase-like 59 206 IPR036423 GO:0006801|GO:0046872
Lan7g0325 209 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 99 109 IPR018152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0325 Lan-Chr7 2192493 2195703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0325 K04565 - bvg:104902979 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0325 7 2192493 2195703 Lan7g0325 7 2192493 2195703 ECH
Lan7g0325 7 2192493 2195703 Lan13g0407 13 2794126 2797768 LSH