Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0198 ATGAAAACCAATAAACCAGAAAAAAAAAACATGACATTCAATGTTTATTTTGTTGTTGGCCTCATTTCTCTACTTAGTTCATCATTCATTGTTTTGACACAAGGTAATGCAATTACTCCACACGTACCTTTACTCAATCGGAACACTTTCCCTAATGGCTTCATCTTTGGTACAGCATCCTCTGCCTATCAGTACGAAGGTGCAGCAAGTGAAGGTGGTAGAGGACCAAGTATATGGGATACCTTCACTCATAAATATCCAGAGAAGGTGAAGGATGGACAAAATGGAGATGTAGCTGTTGATTCATATCACCGCTACAAGGAAGATGTTGCCATCGTGAAGGATATGAATTTGGATGCTTACAGGTTCTCCATCTCTTGGTCTAGAATACTCCCAAAAGGAAAACTTAGTGGAGGTATAAATCAAGAAGGAATCGACTACTATAACAACCTCATCAATGAGCTAATTGCAAATGGTTTGCAACCACTTGTGACCATTTTCCATTGGGATCTTCCACAAGCCTTAGAAGATGAATACGGTGGATTCTTAAGCCCACTCATTGTAAAAGATTTCCAGGACTATGCAGAACTTTGCTTCAAGGAATTTGGAGATAGGGTAAAGCATTGGATAACATTGAATGAACCATGGAGTTTTAGCGAAAATGGATACGCAAAGGGGCATATGGCACCAGGTCGATGTTCTGCTTGGTTGAATCGTACTTGTGTTGGTGGTGATTCTGCAATAGAGCCATATTTGGTTACACATCATCAACTTCTAGCTCATGCAGCAGCAGTTCAAGTTTATAAGACCAAATATCAGGAATCTCAAAATGGTTTAATAGGCATAACCTTGATTGTTACTTGGTCAGTGCCAACCTCAGATAACAAATTCGATCAAAAAGCTGCTGAACGAGCTATTGACTTTATGTATGGATGGTTTATGGATCCTCTAACAAATGGAGAATATCCACAAAGCATGCGATCCTTGGTTAGATCAAGGTTACCAAAGTTCACTAAAGCACAATCTAAGCAACTCATTGGTTCATATGATTTTATTGGCCTAAATTATTACTCTGCTGGTTATGTCACTGATGCCCCTCTATTAAGCAATGCAAGACCCACCTACCAAACTGATTCTCTCGTTGAAATGTCATTCATGCGTGATGGAAAACCCATTGGTGTAAATGTTGCTTCAAACTGGTTGTATGTTTATCCAAGAGGACTCAGAGATCTTTTATTATACACCAAAGAAAAGTATAATAATCCTTTAATTTATATTACAGAAAATGGTATAAATGAATATGATGATCCACAACTATCATTGGAGGAATCTCTTATGGATATTTATAGAGTTGACTACTATTACCGTCATCTTTATTATCTTAAATCTGCAATTGAGGCTGGTGTAAATGTAAAAGCATATTTTGCATGGTCTTTGTTAGACAATTTCGAATGGCATTCGGGCTATACAGTGAGATTTGGAATGAATTTCATAGATTACAAAAATGGTTTGAAAAGATATCCAAAGATCTCTGCACTATGGTTCAAGGAGTTTCTCACACCAGAAGCTAGAGATTATGGTGTTGCCATTGAATAG 1596 0.3759 MKTNKPEKKNMTFNVYFVVGLISLLSSSFIVLTQGNAITPHVPLLNRNTFPNGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHKYPEKVKDGQNGDVAVDSYHRYKEDVAIVKDMNLDAYRFSISWSRILPKGKLSGGINQEGIDYYNNLINELIANGLQPLVTIFHWDLPQALEDEYGGFLSPLIVKDFQDYAELCFKEFGDRVKHWITLNEPWSFSENGYAKGHMAPGRCSAWLNRTCVGGDSAIEPYLVTHHQLLAHAAAVQVYKTKYQESQNGLIGITLIVTWSVPTSDNKFDQKAAERAIDFMYGWFMDPLTNGEYPQSMRSLVRSRLPKFTKAQSKQLIGSYDFIGLNYYSAGYVTDAPLLSNARPTYQTDSLVEMSFMRDGKPIGVNVASNWLYVYPRGLRDLLLYTKEKYNNPLIYITENGINEYDDPQLSLEESLMDIYRVDYYYRHLYYLKSAIEAGVNVKAYFAWSLLDNFEWHSGYTVRFGMNFIDYKNGLKRYPKISALWFKEFLTPEARDYGVAIE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0198 531 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 11 523 - -
Lan7g0198 531 Pfam Glycosyl hydrolase family 1 47 520 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 ProSitePatterns Glycosyl hydrolases family 1 active site. 424 432 IPR018120 -
Lan7g0198 531 Gene3D Glycosidases 37 520 - -
Lan7g0198 531 PRINTS Glycosyl hydrolase family 1 signature 348 362 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 PRINTS Glycosyl hydrolase family 1 signature 424 432 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 PRINTS Glycosyl hydrolase family 1 signature 447 458 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 PRINTS Glycosyl hydrolase family 1 signature 468 485 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 PRINTS Glycosyl hydrolase family 1 signature 492 504 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 54 68 IPR033132 -
Lan7g0198 531 PANTHER GLYCOSYL HYDROLASE 11 523 IPR001360 GO:0004553|GO:0005975
Lan7g0198 531 SUPERFAMILY (Trans)glycosidases 41 519 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0198 Lan-Chr7 1209637 1213100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0198 16 525 Glycoside Hydrolase AT5G44640 53.816 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0198 - K01188 gmx:100792870 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0198 7 1209637 1213100 Lan7g0198 7 1209637 1213100 ECH