Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0190 ATGGCAACTTCGTTGCTACGCAGCATTCGAAGATTTTCCTCTGTTCTCACATTCTCGTATCCTAAAACCTCGCTTTCGGTCTCTACAAGATCAGTTGTGAGGTCCCAAATTCCGATTTGGTTTCCGTCCAGGCATTGTGTCCCGCTTGAAAAGTCAGGTTTTTGGTGTGGTAGTAGAAACTTGAGTTATGGAACTGTTAATCTGGTGATAGAGGGAGGGAAGACCAAGTTTGAGACCAAAGAGGTTGAGCCTCCAAAGAAAGACAAATGGAAAACAAAGAAGAGGTTTAAAATGCAGAAGAAGAGAGAGAAGGAGAAGAGGAAAGCAGCGAATAGGAGAGACCCTCGTCATCTTGGTGTCAAAAGGAAGAAGAAGCAGAAGTTTGCCAGTCCGGAAGAGAGAATCAAGTACAAGCTTGAGAAAGCCAGAATTAAGGAAGCATTGCTCATTGAAAGACTCAAACGATATGAAGTTCCTAAACTTCAGGGTCCTGTTGTAAAACCTGATGGCTTGACAGGGGAGGAACGACATTATTTGAAGAAAATGGCTCAGAAGAGTTCTAATTATCTACAAGTTGGAAGAAGAGGATTATTTGGAGGGGTTATTCTTAATATGCACATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGCCAAGTACATGAATATGCACAAGAACTTGCTAGATTGAGTGGTGGTATTCCAATTCACATATTTGGAAATGACACAATGATATTTTATCGCGGAAAGAACTACGTACAGCCTGATCTTATGTCACCAATAGATACGTTATCCAAGAAAAAGGCACTTGAAAAATCGAAGTATGAGCAATCACTTGAGTCAGTGAGGCGTTTCATTGCTATTGCTGAGAAAGAATTAGAGCTGTATTACAGACACATTGCACTTTATGGTGATCCGAGCAACCGAAATCCATTATCAATGCTGGATGGTCCAAGTGTAAACTCCAGCAGAAAAGGGAATCATGGAATTCACAACGAAAAAAGCGTTGATTTGAATAGTGATTATTTTGCAGCCAACCTCTCAGGGACAGAAGCTGATTCCACAGAGATGGAGCTATCAGAAAGTGAAGATAACGAAGACGAAAACTTGTCAACGAATGAATCAGATTCTGAAGAGGACATCGAATCGGATGATCAAGAAAGGAAGGTTTGTTTTACTACAATGCAAGATGAAAGTGCAAGATCAACCAATGGTTCATCATCAGTGTCCAAACACAGATACCATCATAATAATAAATATTTATTATCTGAACAAATGCCAATAACTAGTGATTAG 1317 0.4009 MATSLLRSIRRFSSVLTFSYPKTSLSVSTRSVVRSQIPIWFPSRHCVPLEKSGFWCGSRNLSYGTVNLVIEGGKTKFETKEVEPPKKDKWKTKKRFKMQKKREKEKRKAANRRDPRHLGVKRKKKQKFASPEERIKYKLEKARIKEALLIERLKRYEVPKLQGPVVKPDGLTGEERHYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPIHIFGNDTMIFYRGKNYVQPDLMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPSNRNPLSMLDGPSVNSSRKGNHGIHNEKSVDLNSDYFAANLSGTEADSTEMELSESEDNEDENLSTNESDSEEDIESDDQERKVCFTTMQDESARSTNGSSSVSKHRYHHNNKYLLSEQMPITSD* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0190 438 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Lan7g0190 438 Coils Coil 93 113 - -
Lan7g0190 438 MobiDBLite consensus disorder prediction 402 418 - -
Lan7g0190 438 MobiDBLite consensus disorder prediction 363 390 - -
Lan7g0190 438 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 393 - -
Lan7g0190 438 SUPERFAMILY YhbY-like 171 264 IPR035920 -
Lan7g0190 438 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 393 IPR040286 -
Lan7g0190 438 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Lan7g0190 438 MobiDBLite consensus disorder prediction 319 333 - -
Lan7g0190 438 MobiDBLite consensus disorder prediction 358 438 - -
Lan7g0190 438 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Lan7g0190 438 MobiDBLite consensus disorder prediction 80 129 - -
Lan7g0190 438 Gene3D - 171 267 IPR035920 -
Lan7g0190 438 MobiDBLite consensus disorder prediction 314 341 - -
Lan7g0190 438 MobiDBLite consensus disorder prediction 90 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0190 Lan-Chr7 1162530 1166218 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0190 - - gmx:100796393 541.191