Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0174 ATGGCGATTCAACACCTTCAACGCTTCAAAATCGAATCCCAACTTGTAAAACCCTTTTCCCCTCTTTTCTTCTTTTCTTCTTCTTCTTCTACTACTACTACTACTTCAAACGATGACACCAAAACCCAAACTCTGATTTCCATTCTGACCCATCAACGTTCAAAATCTCGTTGGAACGCCCTTCGTTCTCTCTGCCCCAACGGAATTGACCCAATCCAATTCTCCCAAATCACATTGCAACTCAAGAACAATCCCCACCTCGCACTTCGATTCTTCAATTGGACCCAATCCAATTCCATTTGCCACCACACTCTCTCTTCATACTCCACCATCATTCACCTCTTTGCACGTGCTCGTCTCTACAAACATGCCTACCACACAATCCGAATCGCTATTCGCACTTCCGAATACGATGATGAACACTGTCGTTTCGATTCTCCGCCTTTAAACCTCTTTGAGACACTCGTTAAGACCTACCAACGTTGTGGCTCTTCTCCTTTTGTGTTTGATTTGCTTACCAAAGCTTGTTTGGAATCTAAAAAGCTCGACCCTTCAATTGAAATTGTTCGGATGTTACTCTCCCGCGGGATCTCCCCTAAAGTTACCACCTTGAATTCTTTGATTTTTAGGGTTTGTAAAAGTCGAGGTTTTGATGCAGGCTATGCAATTTACCGTGAGATTTTTCGGTTAGATAGGTCAAAATGCGAAATTTCGAAGAGGGGTTCTGGTTTTAAAGTTAACCCTAATGTGCATACTTATAACGAGTTAATGCTGTGCTGTTATCAAGATGCTTTGTTTGAGAAGGTTGGAGAGATTTGGAATGAAATGGAGTGTGCTCGAAATGCTTATAGCTATACTTTGATGATGGCGTCTTTGTGCGACGAAGGGAGGGTTGAAGATGCTGAGAAGTTATGGGAAGAAATGAGGAATGAAGGAATAGAGCCTGATGTAATTAGTTACAATACTATGATGGGTGGGTTTTGTAGGATTGGAGATGTTGGAAGGGCTGAAGAGTTTTATAGAGAAATGACATCGGGTGGTATCGAAAGCACTGCTTCAACTTATGATCATCTTGTGAACGGATATTGTATTATTGAGGATGTTGATTCTGCTGTACTTGTTTATAAGGATATGTATAGGAAGGATTTCTGCCCTGTTGCTTCAACTCTTGATGCGATGACTAGTTTACTATGTGACAAGGGTAGGGGTAAGGAAGCTCTAAAGTTAGTGAGAAATGCCATTGGTAAGTTTGGTTTGGTTCCAAAGGGAAACAGTTATGAGGTCTTGATAAAGGGACTGTGTGCCGAGGGGAGAGTGGAGGAAGCATTCAAGGTTCAGGCTGAGATGGTAGGAAAAGGGTTTCAACCCAATTCAGAAATATATGGTGCTTTTATTGATTGGCATGTTAGACAAGGCAATGAGGAACTTGCAGGAGCTTTGAGGGAAGAAATGCTGCAAACACAGATTCAGAGCTAA 1476 0.4187 MAIQHLQRFKIESQLVKPFSPLFFFSSSSSTTTTTSNDDTKTQTLISILTHQRSKSRWNALRSLCPNGIDPIQFSQITLQLKNNPHLALRFFNWTQSNSICHHTLSSYSTIIHLFARARLYKHAYHTIRIAIRTSEYDDEHCRFDSPPLNLFETLVKTYQRCGSSPFVFDLLTKACLESKKLDPSIEIVRMLLSRGISPKVTTLNSLIFRVCKSRGFDAGYAIYREIFRLDRSKCEISKRGSGFKVNPNVHTYNELMLCCYQDALFEKVGEIWNEMECARNAYSYTLMMASLCDEGRVEDAEKLWEEMRNEGIEPDVISYNTMMGGFCRIGDVGRAEEFYREMTSGGIESTASTYDHLVNGYCIIEDVDSAVLVYKDMYRKDFCPVASTLDAMTSLLCDKGRGKEALKLVRNAIGKFGLVPKGNSYEVLIKGLCAEGRVEEAFKVQAEMVGKGFQPNSEIYGAFIDWHVRQGNEELAGALREEMLQTQIQS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0174 491 Gene3D Tetratricopeptide repeat domain 73 232 IPR011990 GO:0005515
Lan7g0174 491 Gene3D Tetratricopeptide repeat domain 262 366 IPR011990 GO:0005515
Lan7g0174 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 422 456 IPR002885 -
Lan7g0174 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Lan7g0174 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 351 385 IPR002885 -
Lan7g0174 491 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 19 489 - -
Lan7g0174 491 Pfam PPR repeat 353 382 IPR002885 -
Lan7g0174 491 TIGRFAM PPR: pentatricopeptide repeat domain 425 457 IPR002885 -
Lan7g0174 491 TIGRFAM PPR: pentatricopeptide repeat domain 283 317 IPR002885 -
Lan7g0174 491 TIGRFAM PPR: pentatricopeptide repeat domain 318 349 IPR002885 -
Lan7g0174 491 TIGRFAM PPR: pentatricopeptide repeat domain 354 385 IPR002885 -
Lan7g0174 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 281 315 IPR002885 -
Lan7g0174 491 Pfam PPR repeat family 425 458 IPR002885 -
Lan7g0174 491 Pfam PPR repeat family 281 329 IPR002885 -
Lan7g0174 491 Gene3D Tetratricopeptide repeat domain 367 491 IPR011990 GO:0005515
Lan7g0174 491 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 19 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0174 Lan-Chr7 1051017 1052492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0174 77 490 Glycosyltransferase AT1G05670 27.098 5.42e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0174 - - lang:109352821 961.444