Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0156 ATGTCAGTTACGGAGTTGAAGGAGCGTCATTTAGCTGCTACTGAAACCGTCAACGATCTCAAGAATCGATTAAAGCATAGGCGCAATTCTCTGCTTGACACTGATATTTTTGCAGTTGCTGGTTACGCAAGATCTCAGGGTACAGCTCCTGTGAGTTTTGGAGCTACTGATCTTGTTTGTTGTAGAACTTTGCAGGGTCATACAGGAAAGGTGTATTCATTGGATTGGACTTCTGAAAGGAATAGGATTGTGAGTGCATCGCAAGATGGCCGGCTAATAGTGTGGAATGCTCTAACAAGGCAGAAAATTCATGCCGTAAGGCTGCCGTGTGCATGGGTCATGACATGTGCCTTCTCACCAACTGGTCAGTCTGTTGCATGTGGTGGTCTTGACAGTGTTTGCTCTATTTTCAATATCAATTCTTCCACTGACAAGGACGGGAACCTACCTGTTTCTCGGATGCTTAGTGGACATAAGGGTTATGTGTCGTCTTGTCAGTATGTTCCAGACGAAGAATCTCATTTAATTACTGGTTCTGGTGATCAGACATGTGTTTTATGGGATGTAACTACTGGCCTTAAAACATCTGTTTTTGGTGGTGAGTTTCAGTCTGGACACACTGCAGATGTACTTAGCATCTCCATTAATGGATCCAACTCAAGAATGTTTGCATCTGGTTCCTGTGATTCAACTGCTCGATTGTGGGATACTCGTGTGGCAAGTAGAGCCGTGCGGACATTTCATGGTCACGAGGGAGATGTTAATGCAGTAAAATTCTTTCCAGATGGAAATAGGTTTGGAACTGGCGGGGATGATGGAACGTGCAGATTGTTTGACATTAGGACTGGACACCAACTTCAAGTATATTATCAGCAGCACAGTGACAATGACATCCCGCCTGTGACTTCAATTGCGTTCTCTGTATCTGGAAGACTTCTTTTTGCTGGATACACAAATGGAGATTGCTATGTTTGGGACACCTTATTGGCAAAGGTGGTCTTGAATTTGGGATCTCTCCAAGATTCTCATGAGAGCAGGATCAGCTGTTTAGGTTTGTCAGCTGATGGAAGTGCCTTGTGTACAGGAAGCTGGGACACAAACTTAAAGATATGGGCATTTGGTGGGCATAGGAGGTAG 1137 0.4433 MSVTELKERHLAATETVNDLKNRLKHRRNSLLDTDIFAVAGYARSQGTAPVSFGATDLVCCRTLQGHTGKVYSLDWTSERNRIVSASQDGRLIVWNALTRQKIHAVRLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNINSSTDKDGNLPVSRMLSGHKGYVSSCQYVPDEESHLITGSGDQTCVLWDVTTGLKTSVFGGEFQSGHTADVLSISINGSNSRMFASGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGGDDGTCRLFDIRTGHQLQVYYQQHSDNDIPPVTSIAFSVSGRLLFAGYTNGDCYVWDTLLAKVVLNLGSLQDSHESRISCLGLSADGSALCTGSWDTNLKIWAFGGHRR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0156 378 PIRSF GNBP_B 1 374 - -
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats profile. 247 288 IPR001680 GO:0005515
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 245 IPR001680 GO:0005515
Lan7g0156 378 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN, BETA SUBUNIT-RELATED 1 375 - -
Lan7g0156 378 SMART WD40_4 57 96 IPR001680 GO:0005515
Lan7g0156 378 SMART WD40_4 195 236 IPR001680 GO:0005515
Lan7g0156 378 SMART WD40_4 332 372 IPR001680 GO:0005515
Lan7g0156 378 SMART WD40_4 282 326 IPR001680 GO:0005515
Lan7g0156 378 SMART WD40_4 148 188 IPR001680 GO:0005515
Lan7g0156 378 SMART WD40_4 240 279 IPR001680 GO:0005515
Lan7g0156 378 SMART WD40_4 99 138 IPR001680 GO:0005515
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 247 283 - -
Lan7g0156 378 Pfam WD domain, G-beta repeat 290 326 IPR001680 GO:0005515
Lan7g0156 378 Pfam WD domain, G-beta repeat 153 188 IPR001680 GO:0005515
Lan7g0156 378 Pfam WD domain, G-beta repeat 204 236 IPR001680 GO:0005515
Lan7g0156 378 Pfam WD domain, G-beta repeat 60 96 IPR001680 GO:0005515
Lan7g0156 378 Pfam WD domain, G-beta repeat 342 371 IPR001680 GO:0005515
Lan7g0156 378 Pfam WD domain, G-beta repeat 244 279 IPR001680 GO:0005515
Lan7g0156 378 Gene3D - 10 372 IPR015943 GO:0005515
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 203 238 - -
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 155 192 - -
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 64 96 - -
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 340 378 - -
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats profile. 340 378 IPR001680 GO:0005515
Lan7g0156 378 CDD WD40 60 372 - -
Lan7g0156 378 Coils Coil 3 23 - -
Lan7g0156 378 PRINTS G protein beta WD-40 repeat signature 83 97 IPR020472 -
Lan7g0156 378 PRINTS G protein beta WD-40 repeat signature 175 189 IPR020472 -
Lan7g0156 378 PRINTS G protein beta WD-40 repeat signature 223 237 IPR020472 -
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats profile. 64 105 IPR001680 GO:0005515
Lan7g0156 378 ProSiteProfiles Trp-Asp (WD) repeats profile. 155 197 IPR001680 GO:0005515
Lan7g0156 378 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA 1 375 IPR016346 GO:0007165
Lan7g0156 378 SUPERFAMILY WD40 repeat-like 57 371 IPR036322 GO:0005515
Lan7g0156 378 ProSitePatterns Trp-Asp (WD) repeats signature. 175 189 IPR019775 -
Lan7g0156 378 PRINTS Beta G protein (transducin) signature 64 80 IPR001632 -
Lan7g0156 378 PRINTS Beta G protein (transducin) signature 83 97 IPR001632 -
Lan7g0156 378 PRINTS Beta G protein (transducin) signature 102 117 IPR001632 -
Lan7g0156 378 PRINTS Beta G protein (transducin) signature 120 137 IPR001632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0156 Lan-Chr7 948260 952266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0156 155 373 Miscellaneous Gene Families AT5G08390 24.201 2.65e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0156 K04536 - gmx:100794776 723.391