Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0126 ATGAAACTATCCAAATTGTACTATCTCACCATTTTTCTCATATTCCTTATTGGTTATGGAAGTTGCCATGATTACCAAGACGCATTATCAAAAGCCATTCTCTTCTTCGAGGGACAACGCTCAGGGTTCTTACCACAGGACCAGAGAATGAGTTGGCGTTCCAATTCAGGTCTGAGTGATGGGTGGAGCTACAACACTGACCTCACCGGAGGATACTACGATGCCGGAGATAACATCAAATTCGGGTTTCCGATGGCTTTTACGACAACAATGTTATCGTGGAGCGTGCTTGAATTCGGAGACATGATGCCACCCAATGAGTTCAGAAACGCCTTGGGAGCAATACGTTGGGCCACTGATTATTTGCTCAAAACTGTTTCTCAGCCCAACCGTATTTTCGTTCAGGTGGGTGATCCAAGCTCAGACCATGATTGTTGGGAGAGGCCGGAGGACATGGACACAAGCAGGACAACATATGCTGTTGATGCACCTAATGCGGCTTCTGATGTCGCTGGTGAAACAGCCGCTGCACTAGCAGCCTCATCCATGGCATTCAGGTCATCGGACCCGGGTTATTCGGAGACATTGTTACGAAATGCTATTAACGCATTTCAATTTGCCGATAGCTACCGGGGTGCTTACAGTGATAATGATAATGTTAAGTATGGGGCCTGCCCTTATTATTGTGATTTTGATGGCTATCAGGATGAGTTGTTATGGGGAGCTGCTTGGCTAAGAAGGGCTACTCAAGATGATAATTTCCTCAACTATATTCAAAGCAATGGCAAAACGCTTGGTGCGGACGACAACATCAACGAGTTTGGTTGGGACAATAAACATGCTGGCCTGAATGTTCTTGTCTCCAAGGAAGTCATAGAAGGAAACATGTACTCTTTGGAATCCTACAAGGACTCAGCACAGAGCTTCATGTGCACACTCATACCTGAATCCCCAAGCTCACACATAGAGTATACTCCTGGTGGACTTGTATACAGACCCGGAGGCAGTAATTTACAGCATGCAACTTCAATAGCTTTCCTTGAGTTGGTATATGCCAATTACTTAACTCACACGTCACAAGATCTCAACTGTGGGAACGTCTATGTTACTGCACAAACACTTCGCGAACATGCTAAGAGGCAAGTTGATTACATTTTGGGTGATAATCCAATGGGGTTGTCTTATATGGTTGGCTATAGCGGCTATTATCCGCAACGCATTCATCACCGTGGATCATCTTTACCTTCCATAAAGGATAATCCTCAGTTTATTGGGTGCAAAGAAGGTTCAATGTACTACAACTCAACCAATCCCAACCCCAATGTACTTGTGGGAGCCATTGTTGGAGGACCTGGAGAAAATGATGAATATGTCGATGATCGAGTTGATTTCAGGAAGTCAGAGCCAACTACTTACATTAATGCACCTTTTGTTGGGGTTCTAGCTTATTTTGCTGCTAATCCCAACTTTACTTGA 1476 0.4451 MKLSKLYYLTIFLIFLIGYGSCHDYQDALSKAILFFEGQRSGFLPQDQRMSWRSNSGLSDGWSYNTDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVLEFGDMMPPNEFRNALGAIRWATDYLLKTVSQPNRIFVQVGDPSSDHDCWERPEDMDTSRTTYAVDAPNAASDVAGETAAALAASSMAFRSSDPGYSETLLRNAINAFQFADSYRGAYSDNDNVKYGACPYYCDFDGYQDELLWGAAWLRRATQDDNFLNYIQSNGKTLGADDNINEFGWDNKHAGLNVLVSKEVIEGNMYSLESYKDSAQSFMCTLIPESPSSHIEYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHTSQDLNCGNVYVTAQTLREHAKRQVDYILGDNPMGLSYMVGYSGYYPQRIHHRGSSLPSIKDNPQFIGCKEGSMYYNSTNPNPNVLVGAIVGGPGENDEYVDDRVDFRKSEPTTYINAPFVGVLAYFAANPNFT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0126 491 Gene3D - 22 487 IPR012341 GO:0005975
Lan7g0126 491 PANTHER ENDOGLUCANASE 24 11 490 - -
Lan7g0126 491 Pfam Glycosyl hydrolase family 9 25 481 IPR001701 GO:0004553|GO:0005975
Lan7g0126 491 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 457 475 IPR033126 -
Lan7g0126 491 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 384 410 IPR018221 -
Lan7g0126 491 PANTHER ENDO-1,4-BETA-GLUCANASE 11 490 - -
Lan7g0126 491 SUPERFAMILY Six-hairpin glycosidases 8 486 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0126 Lan-Chr7 752651 756911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0126 1 487 Glycoside Hydrolase AT1G70710 58.452 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0126 K01179 - gmx:100101849 919.072