Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0119 ATGACACCTCTGCCTCTTCATAAATACCCACTTTCATCACTCCCTTCACACTCCCTCTCTCTTTCACCAAACCCCAAAATGGCCAATAGAAAATCAAACAAGTTTCACCAAAATGCACTAGTTTTGAAGCAAATTCTCAAGAGGTGTTCAAGCCTAGGAAAGAAACATGGTTATGATGATTATGGTATCCCTCTTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTTGGTGAAAACAGAACTAGGTATATAGTTCCAATCTCATTCTTGGCTCACCCTGAATTCCAATCCCTCCTTAGGCAAGCTGAAGAAGAATTTGGCTTTGATCATGATATGGGTCTTACTATTCCTTGTGAAGAAGTTGTTTTCCGCTCTCTCACTTCATCAATGGTCAGATGA 399 0.4035 MTPLPLHKYPLSSLPSHSLSLSPNPKMANRKSNKFHQNALVLKQILKRCSSLGKKHGYDDYGIPLDVPKGHFAVYVGENRTRYIVPISFLAHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSSMVR* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0119 132 Pfam Auxin responsive protein 61 129 IPR003676 GO:0009733
Lan7g0119 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 132 IPR003676 GO:0009733
Lan7g0119 132 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 27 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0119 Lan-Chr7 699457 700298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0119 64 126 Calmodulin-binding Proteins AT3G43120 57.143 4.10e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0119 K14488 - gmx:100500265 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0119 7 699457 700298 Lan13g0194 13 1210795 1211493 LSH