Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0194 ATGGCCATTAGAAAATCAAACAAACTTCACCAAAATGCACTAGTTTTGAAACAAATCCTCAAGAGGTGTTCAAGCCTAGGAAAGAAACATGGTTATGATGATTATGGTCTCCCTCTTGATGTCCCAAAAGGACATTTTGCTGTTTATGTTGGTGAAAATAGAACTAGGTATATTGTTCCTATATCATTCTTAACTCACCCTCAGTTTCAATCCTTACTTAGACAAGCTGAAGAAGAATTTGGCTTTGATCATGATATGGGCATCACTATTCCATGTGAAGAAGTTGTTTTTCGATCTCTAACTTCATCAATGATCAGATGA 321 0.3583 MAIRKSNKLHQNALVLKQILKRCSSLGKKHGYDDYGLPLDVPKGHFAVYVGENRTRYIVPISFLTHPQFQSLLRQAEEEFGFDHDMGITIPCEEVVFRSLTSSMIR* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0194 106 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
Lan13g0194 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 106 IPR003676 GO:0009733
Lan13g0194 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0194 Lan-Chr13 1210795 1211493 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0194 38 100 Calmodulin-binding Proteins AT3G43120 55.556 1.14e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0194 K14488 - rcu:107260773 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0194 13 1210795 1211493 Lan13g0194 13 1210795 1211493 ECH
Lan7g0119 7 699457 700298 Lan13g0194 13 1210795 1211493 LSH