Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0078 ATGAAGAATGTTAACATACCTTTGTGCATGCTTCTCATAGCATTAGTGCACCTAGGTGCAAGTGTACCCTTAAGCTTCAACTATGGTGATGCCCTTGACAAAAGTTTATTGTTCTTTGAAGCACAAAGGTCAGGTAAATTACCATTGCAGCAGCAGCGTGTTAAATGGCGTGGTGATTCTGGTCTCAATGATGGATTTCAACAAGGAGTAGATTTGGTGGGTGGGTATTATGATGCAGGAGATCATGTCAAGTTTGGGCTTCCAATGGCATATAGTGTCACAATGCTTGCATGGGGAGCAATTGAATTCAGGAAAGAAATCAGTGACATAAACCAATTGGAAAACACATTATGGGCTATTAAATGGGGAACTGATTACCTCATCAAAGCACATCCTCAGCCTAATGTTCTTTATGGTCAGGTGGGTGATGGGGCTTCTGATCACTACTGCTGGGAACGCGCTGAAGACATGACGACTTCAAGAACTGCGTACAGAATTGATGAAGCGCACCCTGGTTCAGATCTTGCTGGTGAAACTGCAGCTGCATTGGCTGCAGCTTCCATTGCTTTCAGCCCCTACAACTCTTCTTACTCTGCTCTTTTACTAGTTCATGCAAAGCAGCTCTTCACATTTGCAGATAGGTTCAGAGGTCTATACGATAACTCCATATATAGTGCTCAGCAATTCTACCCTTCTTCCGGCTACTCCGATGAATTGTTATGGGCTGCTGCTTGGTTGTATGAAGCAAGTAGTGATGAGTACTACCTAAAGTATGTAGTTGACAATGCTGTCTATATGGGTGGAACTGGTTGGGCAGTCAAAGAGTTCAATTGGGACAACAAATATGCTGGTTTGCAGATCCTTCTGTCAAAAATACTACTAGAAGGAAAGGCTGGTTCTTATGCCTCAACACTTAAGCAATACCAGGCCAAGGCAGATTATTTTGCATGTGCTTGCTTGCAGAAGAATGATGGTTACAATGTCCAGAAAACTCCAGGTGGCTTACTATATGTGCACGACTGGAACAACCTGCAGTATGTTTCTTCTGCTGCATTTCTTTTAGTTGTTTACTCTAATTATCTATCAGCTGCAAAAACCCAACTCAACTGTCCAGAGGGACAAATTCAGCCTCCGGAACTCATTAGTTTTTCAAAGTCACAGGTTGACTATATCCTTGGTAAAAACCCAAAGTATATTAGCTACTTGGTTGGATATGGACAAAATTATCCTGTTCATGTTCACCACAGAGGAGCTTCCATTGCTTCAATATTTTCTCTTCAATCTGAGGTTGGCTGCAGCCAAGGATTTGATGCATGGTATAACAATGCTGAGGCAAATCCTAATGTTATCTATGGCGGCCTTGTGGGGGGTCCAGATGGGAATGACGCCTTCTCCGATGAGAGATCCAACTACGAACAAACTGAACCTACACTTGCAGGCAATGCTCCTCTTGTAGGCATCTTTGCCAAACTGCAGAGTTTATATGGTAATATAGGTTCCTACCACCAAAATGAAGTACCAGTGCCCCAGCAGAAAGCACCAAGTACAGGAACATGGAAAACACAGGTACCTAAAACATCAGAAGTTGCAAGTGTACCAGTTGAGTTTCTTCACTCAATTACTAGTTCATGGAGTGTTGGAGATGCAACTTATTACCGCCACAGGGTGATAATCAAGAACACTTCATTGAAGCCAATCTCAGATCTTCAATTGGTGATTGAGAATCTGTCAGGTTCACTATGGGGTCTCTCTCCAACAAAAGAGAAGAACACCTATGAGCTACCCCAATGGCTCAAAGTCTTGAATCCTGGCTCAGAGTATATGTTTGTTTATGTTCAAGGAGGAGACCAAGCAAAAATATCCATTCAAAGTTTCCACTAA 1881 0.4258 MKNVNIPLCMLLIALVHLGASVPLSFNYGDALDKSLLFFEAQRSGKLPLQQQRVKWRGDSGLNDGFQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFRKEISDINQLENTLWAIKWGTDYLIKAHPQPNVLYGQVGDGASDHYCWERAEDMTTSRTAYRIDEAHPGSDLAGETAAALAAASIAFSPYNSSYSALLLVHAKQLFTFADRFRGLYDNSIYSAQQFYPSSGYSDELLWAAAWLYEASSDEYYLKYVVDNAVYMGGTGWAVKEFNWDNKYAGLQILLSKILLEGKAGSYASTLKQYQAKADYFACACLQKNDGYNVQKTPGGLLYVHDWNNLQYVSSAAFLLVVYSNYLSAAKTQLNCPEGQIQPPELISFSKSQVDYILGKNPKYISYLVGYGQNYPVHVHHRGASIASIFSLQSEVGCSQGFDAWYNNAEANPNVIYGGLVGGPDGNDAFSDERSNYEQTEPTLAGNAPLVGIFAKLQSLYGNIGSYHQNEVPVPQQKAPSTGTWKTQVPKTSEVASVPVEFLHSITSSWSVGDATYYRHRVIIKNTSLKPISDLQLVIENLSGSLWGLSPTKEKNTYELPQWLKVLNPGSEYMFVYVQGGDQAKISIQSFH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0078 626 SMART CBM49_2 534 616 IPR019028 GO:0030246
Lan7g0078 626 Pfam Glycosyl hydrolase family 9 28 487 IPR001701 GO:0004553|GO:0005975
Lan7g0078 626 Gene3D - 24 495 IPR012341 GO:0005975
Lan7g0078 626 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Lan7g0078 626 PANTHER ENDOGLUCANASE 5 10 581 - -
Lan7g0078 626 SUPERFAMILY Six-hairpin glycosidases 26 497 IPR008928 GO:0005975
Lan7g0078 626 Pfam Carbohydrate binding domain CBM49 535 613 IPR019028 GO:0030246
Lan7g0078 626 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Lan7g0078 626 PANTHER ENDO-1,4-BETA-GLUCANASE 10 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0078 Lan-Chr7 393668 397652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0078 26 626 Glycoside Hydrolase AT1G48930 67.388 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0078 K01179 - gmx:100802420 1050.04