Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0052 ATGACGACGTCGTTTGGAGGAGGTGGTAGGTCAGTGAATGTTGTGAAAGAGGTTCATATTCCGAAGTTGAATGCAATTATCAATCTCTCACGCAATGCAATTTCTGTTCCCTCAACCAATCGCTCTCTCTCCCGAATACGCGCCGTCTCCACTCCTGCAAAGCCTGCAACTGTCACTGAGAAGCGCAGCAAAGTTGAAATATTCAAAGAACAAAGTAATTTCATAAGGTATCCTCTTAATGAAGAGTTGTTGACAGATGCCCCTAATATAAATGAACCTGCCACACAATTGATCAAGTTTCATGGTAGCTATCAACAGTACAACAGAGATGAGCGTGGTTCAAGAACCTACTCGTTTATGCTACGTACGAAGAATCCTTGCGGGAAGGTTCCAAACCAACTTTACTTGACCATGGATGATCTTGCTGACCAGTTTGGAATTGGAACACTTCGTTTGACCACACGACAAACATTTCAACTTCATGGTGTCCCCAAGAAGGACCTTAAGACAGTAATGAGTACCATTATTCAGAATATGGGCTCAACTCTTGGTGCATGTGGTGATCTAAACAGAAATGTACTTGCTCCTGCTGCTCCATTTGTGAGAAAAGATTACCTCTTTGCCCAACAAACTGCGGAAAACATTGCTGCGCTGCTGACTCCTCAATCTGGTTTCTACTATGATATTTGGGTAGATGGGGAAAGGGTTTTGACATCAGAGCCCCCTGAAGTAATACAGGCACGAAATGACAATTCTCATGGCACTAACTTTACAGATTCACCAGAGCCCATCTATGGAACTCAGTTCTTGCCAAGGAAATTCAAAATTGCAGTTACCGTGCCAACTGATAACTCAGTGGATCTTCTCACAAATGATATTGGTGTTGTTGTCATTACTGATGATGCTGGGGAGCCTCAAGGGTTCAACATATATGTTGGTGGTGGAATGGGAAGAACACATAGGTTGGAGGCCACTTTCCCTCGATTGGCTGAACCATTGGGTTACGTACCAAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTTGTCACACAGCGAGAAAATGGTAGAAGAGATGACCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCTTGGGGAATTGAAAAGTTCAAAAGTGTAGTGGAGCAATATTATGGCAAGAAATTTGAACCTTTCCGTGAATTACCTGAGTGGGAATTTAAAAGTCATCTTGGGTGGCATCAACAGGGCGATGGCAGTTTATTCTGTGGGCTTCATGTTGATAGTGGTCGTATTGGTGGAAAAATGAAAAAGACATTGAGGGAGGTTATTGAGAAGTATAATTTGAATGTTCGTATCACTCCAAATCAGAACATCATTTTGACTGACATCCGTGCTTCATGGAAGCGTCCCATCACAACTGCTCTTGCTCAAGCTGGCCTGCTGGAACCTAGGTTTGTAGATCCCCTCAATATAACAGCAATGGCATGTCCTGCTTTCCCTCTATGCCCACTGGCAATTACTGAAGCTGAACGTGGAATACCAGACATTCTTAAGCGGATTCGTGCTGTCTTTGAGAAGGTTGGTCTGAAGTATAACGAGTCTGTGGTTGTAAGGATAACAGGCTGCCCTAATGGTTGTGCTAGACCATACATGGCCGAGCTTGGACTGGTTGGTGATGGTCCAAACAGCTACCAGATTTGGCTTGGAGGTAACAAAAGCCAAACTTCATTAGCTCAAAGTTTCATGGAGAAGGTGAAGATTCTAGACCTCGAAAAGGTTTTGGAGCCATTGTTTTATCACTGGAAGCAAAAGCGCCAGTCTAAAGAATCATTTGGTGACTTCACAACCCGCATTGGATTTGAGAAGCTGAAGGAATATATTGAGAAATGGGAGGGCCCAGTGGCACCGGCACGCCACAACCTCAGGCTCTTTGCTGACAAAGAGACATATGAAGCAGTGGATGAATTAGCAAAGCTTCAAAACAAGAGTGCTTATCAGTTGGCCATGGAAGTGATCCGCAATTTTGTGGCATCTTCCCAAAATGGGAAAAGTGAATGA 2043 0.4342 MTTSFGGGGRSVNVVKEVHIPKLNAIINLSRNAISVPSTNRSLSRIRAVSTPAKPATVTEKRSKVEIFKEQSNFIRYPLNEELLTDAPNINEPATQLIKFHGSYQQYNRDERGSRTYSFMLRTKNPCGKVPNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVPKKDLKTVMSTIIQNMGSTLGACGDLNRNVLAPAAPFVRKDYLFAQQTAENIAALLTPQSGFYYDIWVDGERVLTSEPPEVIQARNDNSHGTNFTDSPEPIYGTQFLPRKFKIAVTVPTDNSVDLLTNDIGVVVITDDAGEPQGFNIYVGGGMGRTHRLEATFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFKSVVEQYYGKKFEPFRELPEWEFKSHLGWHQQGDGSLFCGLHVDSGRIGGKMKKTLREVIEKYNLNVRITPNQNIILTDIRASWKRPITTALAQAGLLEPRFVDPLNITAMACPAFPLCPLAITEAERGIPDILKRIRAVFEKVGLKYNESVVVRITGCPNGCARPYMAELGLVGDGPNSYQIWLGGNKSQTSLAQSFMEKVKILDLEKVLEPLFYHWKQKRQSKESFGDFTTRIGFEKLKEYIEKWEGPVAPARHNLRLFADKETYEAVDELAKLQNKSAYQLAMEVIRNFVASSQNGKSE* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0052 680 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 405 477 IPR036136 GO:0016491
Lan7g0052 680 TIGRFAM sir: sulfite reductase, ferredoxin dependent 53 625 IPR011787 GO:0020037|GO:0050311|GO:0051539
Lan7g0052 680 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 484 633 IPR045854 -
Lan7g0052 680 Pfam Nitrite and sulphite reductase 4Fe-4S domain 485 624 IPR006067 GO:0016491|GO:0020037|GO:0051536
Lan7g0052 680 Pfam Nitrite and sulphite reductase 4Fe-4S domain 212 390 IPR006067 GO:0016491|GO:0020037|GO:0051536
Lan7g0052 680 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 187 402 IPR045854 -
Lan7g0052 680 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 59 186 IPR036136 GO:0016491
Lan7g0052 680 Gene3D Sulfite Reductase Hemoprotein, domain 1 482 629 IPR045854 -
Lan7g0052 680 PANTHER SULFITE REDUCTASE [NADPH] SUBUNIT BETA-RELATED 33 627 IPR045169 GO:0016491|GO:0020037|GO:0051536
Lan7g0052 680 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 535 551 IPR006066 GO:0016491|GO:0020037|GO:0051536
Lan7g0052 680 Gene3D Sulfite Reductase Hemoprotein, domain 1 186 391 IPR045854 -
Lan7g0052 680 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 408 470 IPR005117 GO:0016491
Lan7g0052 680 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 116 174 IPR005117 GO:0016491
Lan7g0052 680 Gene3D Sulfite Reductase Hemoprotein;Domain 2 392 478 - -
Lan7g0052 680 PRINTS Sirohaem Fe-binding site signature 486 504 IPR006066 GO:0016491|GO:0020037|GO:0051536
Lan7g0052 680 PRINTS Sirohaem Fe-binding site signature 535 553 IPR006066 GO:0016491|GO:0020037|GO:0051536
Lan7g0052 680 PANTHER BNAA01G31570D PROTEIN 33 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0052 Lan-Chr7 250874 255339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0052 K00392 - gmx:100790764 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0052 7 250874 255339 Lan13g0100 13 592732 597300 LSH