Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0040 ATGAGTTTCAAAAACGCGAATGTTCCAGTTGGTAGAATCTCTGCTTTGATTAAAGTTAGCATAATTGGTGGTCTTGTTGTATATGGTGCTGGAAATGCTTTGTATAATGTTGAGGGAGGTCATCGCGCCATTGTCTTTAATCGCCTCACTGGTGTTAAAGATAAGGTGTATCCTGAAGGGACACATATCATTATTCCATGGTTTGAAAGACCTGTGATCTATGATGTTCGTGCACGACCTCATTTAGTCGATAGTACTTCTGGAAGCCGTGATCTTCAAATGGTAAAAATCGGACTTAGAGTCCTAACTCGGCCTGTGCCAGACCAATTACCTACGATTTATCGAACCCTGGGTGAGAATTATAATGAAAGGGTTCTACCTTCAATCATACATGAAACTCTCAAAGCTGTGGTTGCACAGTACAATGCCAGTCAGCTCATTACTCAGAGAGAGAATGTTAGCCGAGAAATAAGGAAGATATTGACTCAAAGGGCCTCTCAGTTTAATATTGCATTGGATGATGTGTCAATCACGAACTTAACATTTGGGAGGGAATTCACTGCTGCAATTGAAGCCAAGCAGGTTGCAGCTCAAGAAGCTGAGAGGGCTAAATTTGTTGTAGAAAAAGCTGAACAAGACAAAAGAAGTGCTGTTATTAGAGCACAGGGTGAAGCCAAGAGTGCCCAGTTGATTGGTCAGGCTATTGCCAGTAATCCTGCATTTACGACCTTAAGGAAGATAGAAGCCGCGAGGGAAATTGCTCAAACAATTTCAAATTCTGCCAACAAGGTTTACTTGAATTCAGATGACCTCTTGCTGAATCTCCAAGAGTTAAATTTGGAGCCTAGTGGGAAGAGATAG 861 0.417 MSFKNANVPVGRISALIKVSIIGGLVVYGAGNALYNVEGGHRAIVFNRLTGVKDKVYPEGTHIIIPWFERPVIYDVRARPHLVDSTSGSRDLQMVKIGLRVLTRPVPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTQRASQFNIALDDVSITNLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIASNPAFTTLRKIEAAREIAQTISNSANKVYLNSDDLLLNLQELNLEPSGKR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0040 286 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 3 283 - -
Lan7g0040 286 SMART PHB_4 33 194 IPR001107 -
Lan7g0040 286 PANTHER PROHIBITIN 3 283 IPR000163 GO:0016020
Lan7g0040 286 SUPERFAMILY Band 7/SPFH domain 65 201 IPR036013 -
Lan7g0040 286 CDD SPFH_prohibitin 34 228 IPR000163 GO:0016020
Lan7g0040 286 Coils Coil 193 213 - -
Lan7g0040 286 Pfam SPFH domain / Band 7 family 36 211 IPR001107 -
Lan7g0040 286 PRINTS Prohibitin signature 77 93 IPR000163 GO:0016020
Lan7g0040 286 PRINTS Prohibitin signature 95 114 IPR000163 GO:0016020
Lan7g0040 286 PRINTS Prohibitin signature 118 136 IPR000163 GO:0016020
Lan7g0040 286 PRINTS Prohibitin signature 141 157 IPR000163 GO:0016020
Lan7g0040 286 PRINTS Prohibitin signature 164 183 IPR000163 GO:0016020
Lan7g0040 286 PRINTS Prohibitin signature 189 212 IPR000163 GO:0016020
Lan7g0040 286 PRINTS Prohibitin signature 212 228 IPR000163 GO:0016020
Lan7g0040 286 Gene3D Band 7 domain 62 196 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0040 Lan-Chr7 200984 202826 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0040 K17081 - gmx:100811958 501.516