Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0010 ATGGCAAAATTGTCATTAATAATGACAACCACAGTGTTGGTGATGGTAGCAATGGCAAATGCAGCTTCACTTAATTACAAAGAAGCTTTGACAAAGAGCATTATGTTTTTTGAAGGCCAGAGGTCAGGGAAGTTGCCACCTTCTCAACGCATTACATGGCGAAAAGACTCTGCCCTTAATGATGGCTCTGATCTTAATATTGATATGGTAGGTGGATACTATGATGCTGGTGACAATGTGAAATTCCATTTTCCAATGGCATTCACAACAACGATGCTAGCTTGGAGTGTGATAGAATTTGGAGGGAAGATGGATTCAGATCTGCAACATGCATTGGAAGCTGTTAGGTGGGGATCTGATTATTTCCTTAAAGCTACAAATAAAGAAGATAGTATTGTAGCACAAGTTGGAGAATCTAAAGTTGATCATGGTTGTTGGGAGAGGCCAGAAGACATGGACACTTCTAGGACCACATTTGTTCTCTCTAAAGAAAAACCTGGTTCAGATGTCTCAGGTGAGATTGCTGCTGCTCTTGCAGCATCTTCCATTGTATTTCTGAATACGGATGCTACGTATTCCAAACAGCTTCTCGACAGGGCCAAAAAGGTGTTTGACTTTGCAAACAAGTATCGTGGAAAATATAGTGATAGCGTAGGTGACGCTTGTCCTTTCTACTGTGACGATAACTACATGGACGAGTTGGTTTGGGCTGCAGCATGGGTGTATAAGGCGACTAAGCAGACAGATAACTATTATGGGGATTTTGTACAGCAAAACATACAAAGCATAGGTTATGGTTTTGCTGAATTTGGCTGGGCTAACAAGGATGCTGGCATTAATGTGCTTGTTTCTCAGTGGGTGATAAAAGATAAATCCAAGTCAAGTCCTTTCGTTGATAGTGCAAACCGGTTCATATGCTCTTTGTTGCCACAGTCGAAACAGAAATCAGTGTGGTATAGTAAAGGTGGGCTTATGTTCAAACCTGGAGGAAGTAACTTACAACACGCAACATCTATATCTTTTCTGATGATTGTTTATGCAAGCTACTTGCGTAGTGCGGGCCAACAAGTAAATTGTGAAGACAAGTCTGTCTCTGCCACCCCAGACCAACTCATAACACTCGCAAGATCTCAGACGGATTACATATTAGGACAAAACCCGCTAGGGATGTCATATATGGTGGGTTATGGAAACAAGTTTCCTCAGAAGATACACCATCGCGGTTCAACACTTCCATCTTTGAGTATTCACCCACAAAAAATTGAATGTGGTGAAGGATACAATTATTTCAAATTAACAACTCCTAATCCCAACATCCTTACCGGTTCTGTAGTTGGAGGGCCTGCAGATGATGATTCTTTTCTAGACTCACAATATAATATTTCACAATCTGAGCCAACAACTTACATCAATGCTCCTTTTGTTGGTGTTTTGGCTTACTTCAACAAGCCCTAG 1455 0.411 MAKLSLIMTTTVLVMVAMANAASLNYKEALTKSIMFFEGQRSGKLPPSQRITWRKDSALNDGSDLNIDMVGGYYDAGDNVKFHFPMAFTTTMLAWSVIEFGGKMDSDLQHALEAVRWGSDYFLKATNKEDSIVAQVGESKVDHGCWERPEDMDTSRTTFVLSKEKPGSDVSGEIAAALAASSIVFLNTDATYSKQLLDRAKKVFDFANKYRGKYSDSVGDACPFYCDDNYMDELVWAAAWVYKATKQTDNYYGDFVQQNIQSIGYGFAEFGWANKDAGINVLVSQWVIKDKSKSSPFVDSANRFICSLLPQSKQKSVWYSKGGLMFKPGGSNLQHATSISFLMIVYASYLRSAGQQVNCEDKSVSATPDQLITLARSQTDYILGQNPLGMSYMVGYGNKFPQKIHHRGSTLPSLSIHPQKIECGEGYNYFKLTTPNPNILTGSVVGGPADDDSFLDSQYNISQSEPTTYINAPFVGVLAYFNKP* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0010 484 Pfam Glycosyl hydrolase family 9 26 478 IPR001701 GO:0004553|GO:0005975
Lan7g0010 484 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 381 407 IPR018221 -
Lan7g0010 484 Gene3D - 22 483 IPR012341 GO:0005975
Lan7g0010 484 PANTHER ENDO-1,4-BETA-GLUCANASE 8 483 - -
Lan7g0010 484 SUPERFAMILY Six-hairpin glycosidases 25 483 IPR008928 GO:0005975
Lan7g0010 484 PANTHER ENDOGLUCANASE 8 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0010 Lan-Chr7 39534 41805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0010 1 482 Glycoside Hydrolase AT1G70710 55.102 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0010 K01179 - gmx:100814370 660.988