Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0003 ATGGCTGATACTCATTCTAACCCATCTCCTCCTCATCCTCATCCTCATCCTCCTTCTGTTACTGTCACAGAAACAGATCTATCATCCACTCTTGTAACTCCTCAGCTTCAACAATCAACTGAAACCACCACCACCACCACCACCACCACCACTGGTTTCAATGATGTAGTAGAAGAAAAACAACAAGTATCTGCTGACACTGCTACTGCTGCCTCGTCAGCATCATCATCATCCACTTCCAACAAGATGATTATTCCACACAATCTCCTTTCATTCAAGGAAGAGAGCAATAAAGTTTCCGATCTCTCCGATCCCCAAAGAAACTCTCTTCAACAACTTAAGAACCTACTCACTGGCGATCCCAAATATGAGGTTTCCATTTGGGGAGTTCCTCTTCTCAAAGATGACAGGACTGACATCATCCTCCTCAAGTTCCTCAGAGCTCGTGACTTCAAAGTCAAGGATGCACTCACCATGATTACTAACACCCTCAAATGGCGAAAGGACTTTGATATAGATGCACTCATTGATGAAGATCTGGGTGATGACTTTGACAAGGTTGTGTTCATGCACGGTTATGATAGAGAAGGTCATCCAGTGTGTTATAATGTCTATGGTGAGTTTCAGAACAATGATCTCTATCACAAAGCTTTCTCCAATCAGGAAAGGACAACTAAGTTTCTTAGATGGAGGATTCAGTTCTTGGAGAGGAGTATCAGGAATCATCTTCATTTCACTCAAGATGGAGTTAATACAATTCTTCAAGTCAATGACTTTCACAACTCTCCTGGTCCTGCTAAACGCCAACTTCGCATCGCCACCAAACAAGCCTTGCAGTTACTTCAGGACAATTATCCTGAGTTCGTCTCTAAACAGGTTTTCATCAATGTCCCTTGGTGGTATCTTGCATTCTATACCATGATCAGTCCCTTCATGACACACAGGACCAAAAGCAAATTTGTGTTCGCAGGACCATCCAAGTCTCCCGATACCCTTTTCAAGTATATATCTCCTGAGCAAGTGCCTGTACAGTATGGTGGCCTAAGTGTTGATTTTTGTGATTGCAACCCTGATTTCAGTATGTCTGATCCTATCACAGAGATTCCTTTAAAGCCAAACACAAAACAGACAGTAGAAATTGCTATTTATGAGACATGCATTATTGTTTGGGAGCTGCGAGTGGTGGGCTGGGAGGTTAGCTATAGTTCTGAATTCAAGCCTGATGCTAAAGATGGATATACAGTTATCATCCAGAAAACCACAAAGATGTCCCCTACTGATGAACCAGTGGTTTCCAATAGCTTTAAAGTTGGTGAACTCGGCAAATTATTCCTCACTATCGACAATCCCACCTTGAAAAAGAAGAGGATTCTTTACAGATTCAAGATCAAGCCCTATTCTGATTGA 1407 0.4215 MADTHSNPSPPHPHPHPPSVTVTETDLSSTLVTPQLQQSTETTTTTTTTTTGFNDVVEEKQQVSADTATAASSASSSSTSNKMIIPHNLLSFKEESNKVSDLSDPQRNSLQQLKNLLTGDPKYEVSIWGVPLLKDDRTDIILLKFLRARDFKVKDALTMITNTLKWRKDFDIDALIDEDLGDDFDKVVFMHGYDREGHPVCYNVYGEFQNNDLYHKAFSNQERTTKFLRWRIQFLERSIRNHLHFTQDGVNTILQVNDFHNSPGPAKRQLRIATKQALQLLQDNYPEFVSKQVFINVPWWYLAFYTMISPFMTHRTKSKFVFAGPSKSPDTLFKYISPEQVPVQYGGLSVDFCDCNPDFSMSDPITEIPLKPNTKQTVEIAIYETCIIVWELRVVGWEVSYSSEFKPDAKDGYTVIIQKTTKMSPTDEPVVSNSFKVGELGKLFLTIDNPTLKKKRILYRFKIKPYSD* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0003 468 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 177 347 IPR001251 -
Lan7g0003 468 ProSiteProfiles GOLD domain profile. 358 463 IPR009038 -
Lan7g0003 468 Pfam CRAL/TRIO, N-terminal domain 110 162 IPR011074 -
Lan7g0003 468 SUPERFAMILY CRAL/TRIO N-terminal domain 97 179 IPR036273 -
Lan7g0003 468 SMART sec14_4 181 350 IPR001251 -
Lan7g0003 468 Gene3D - 95 382 IPR036865 -
Lan7g0003 468 SMART CRAL_TRIO_N_2 138 163 IPR011074 -
Lan7g0003 468 Pfam CRAL/TRIO domain 186 347 IPR001251 -
Lan7g0003 468 PANTHER PATELLIN-1 35 117 IPR044834 GO:0008289
Lan7g0003 468 PANTHER PATELLIN-1 122 468 IPR044834 GO:0008289
Lan7g0003 468 SUPERFAMILY CRAL/TRIO domain 187 356 IPR036865 -
Lan7g0003 468 MobiDBLite consensus disorder prediction 1 54 - -
Lan7g0003 468 CDD SEC14 183 348 IPR001251 -
Lan7g0003 468 PANTHER PATELLIN-3 122 468 - -
Lan7g0003 468 PANTHER PATELLIN-3 35 117 - -
Lan7g0003 468 MobiDBLite consensus disorder prediction 21 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0003 Lan-Chr7 18786 20996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0003 142 342 Acyl Lipid Metabolism Gene Families AT5G47730 26.636 2.00e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0003 - - gmx:100804006 633.639