Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2189 ATGAGTGGCGTTTGTTTTATACAACTAACAACAGTAGTAGTGTTACTACTGTCCCTATCCTCCGCCGTGTGGTCATGTCCGCCGTCAGATAGGGCGGCGCTGTTGGCCTTCAAGGCAGCTCTCAAAGAACCGTACCTCGGCATATTCAACTCATGGACCGGCACCGACTGCTGCCACAAATGGTACGGCGTCAGCTGCGACCAGGAGACCCGCCGCGTCGCCGATATCAACCTCCGTGGCGAGTCGGAAGAGCCGATCTTCAATAAAGCTCACCGTACCGGTTACATGACCGGTTACATCTCTCCGGCGATATGTAAACTCACTCGTCTTTCCAGCTTCACTATTGCAGATTGGAAAGGAATCTCCGGCGAGATACCACGTTGCATATCGTATTTACCTTTCCTCCGAATCATCGATCTCGTCGGGAACAAAATCTCCGGCACAATCCCACCGGAAATTGGTAGGCTCCAGCGGTTGACTGTGCTCAACGTCGCCGATAATCTCATCTCCGGCACAATCCCAGTGTCGCTGGCCAACTTAACAAGCTTGATGCACTTGGATATCCGTAATAACTACATATCTGGGCCTATCCCACGCAGCATAGGCCGACTTAGAATGCTAAGTCGGGCTTTGCTAAGTGGAAATAGACTCAGCGGAGTTATTCCAGATTCAATTTCTCGTATTTATCGTTTGGCAGATCTAGATCTATCTCGAAATCGAATATATGGGCCCATTCCAGAATCGTTAGGTAAAATGGCTGTCCTTGCAACATTGAATTTAGATTTAAATAAAATTTCGGGACAAATTCCGATAAGTCTTCTAAATTCAGGAATCAGTGATTTGAACTTAAGCCGCAATAGCTTAGAAGGTAATATACCCAATGCGTTCAGCGCAAGATCTTACTTCACAGCTTTGGATTTGTCTTATAATAACTTGAAAGGGTCCATACCAAAATCTATATCATCTGCTTCTTATGTTGGACACTTGGATTTGAGTCACAACCATCTTTGTGGCCAAATTCCGGTGGGTTCGCCTTTCGATCACCTCGAAGCGTCATCATTTGTCTATAACGATTGCCTATGTGGGAAGCCACTCAAAGCTTGTTAA 1107 0.4643 MSGVCFIQLTTVVVLLLSLSSAVWSCPPSDRAALLAFKAALKEPYLGIFNSWTGTDCCHKWYGVSCDQETRRVADINLRGESEEPIFNKAHRTGYMTGYISPAICKLTRLSSFTIADWKGISGEIPRCISYLPFLRIIDLVGNKISGTIPPEIGRLQRLTVLNVADNLISGTIPVSLANLTSLMHLDIRNNYISGPIPRSIGRLRMLSRALLSGNRLSGVIPDSISRIYRLADLDLSRNRIYGPIPESLGKMAVLATLNLDLNKISGQIPISLLNSGISDLNLSRNSLEGNIPNAFSARSYFTALDLSYNNLKGSIPKSISSASYVGHLDLSHNHLCGQIPVGSPFDHLEASSFVYNDCLCGKPLKAC* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2189 368 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Lan6g2189 368 Pfam Leucine rich repeat 279 336 IPR001611 GO:0005515
Lan6g2189 368 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 368 - -
Lan6g2189 368 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lan6g2189 368 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 368 - -
Lan6g2189 368 SUPERFAMILY L domain-like 25 366 - -
Lan6g2189 368 Gene3D Ribonuclease Inhibitor 24 93 IPR032675 -
Lan6g2189 368 Gene3D Ribonuclease Inhibitor 94 368 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2189 Lan-Chr6 32272771 32274147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2189 91 368 Receptor kinase-like Gene Family AT5G46330 36.972 2.74e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2189 - - gmx:100804739 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2189 6 32272771 32274147 Lan10g0336 10 2245996 2247190 LSH
Lan6g2189 6 32272771 32274147 Lan7g0207 7 1289970 1291412 PCT
Lan7g0207 7 1289970 1291412 Lan6g2189 6 32272771 32274147 PCT