Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2078 ATGGATGGAAGTGATATATACAGAGCAAGTAATAGTTTACGAGCTAGAAGTTCAACAGTTTGGAGAGATAGTGGAGTTGAAGTATTCTCAAAATCTACAAGAGAAGAAGATGATGAAGAAGCTCTTAAATGGGCTGCACTTGAAAAGTTACCAACTTATAATCGTTTAAGGAAAGGGTTGTTAACAACTTCACATGGAGCTGCTAGTGAAATTGTTGTCACTGATCTTGCTCATCAAGAAAGACAGAAACTTCTTGATAGGTTGGTCAAAGTTGCTGAAGAAGATAATGAGAAGTTCTTGTTGAAGCTCAGAGAGAGAGTTGATAGAGTTGGGCTTGATATTCCAACAATTGAAGTTCGATATGAGCACATGAAAATTGAGGCAGAAGCTTTTGTGGGAGGTAGAGCTTTACCATCATTCATCAACTCTGCTACTAATGTAATAGAGGGTTTGTTGAATCTTCTCCATATTATTCCAACCAAAAAGAAACATGTGACTATTCTTAAGGATGTTAGTGGTATCATCAAACCTCGTAGGATGACACTGCTTCTAGGTCCTCCTGGTTCAGGAAAGACCACACTATTGTTGGCCTTGTCAGGAAAGCTTGATCCAAGTCTTCAGGTAACTGGGAAAGTGACATATAATGGGCATGAAATGAATGAGTTTGTTCCTCAGAGAACTGCTGCATATATCAGCCAACATGATGTTCATATTGGAGAAATGACTGTGAGGGAAACCTTGGCCTTTTCGGCAAGGTGCCAAGGAGTCGGATCGCGTTACGATATGTTATCTGAGTTGTCTAGAAGAGAAAAGGCAGCAAATATCAAACCTGACCCTGATATCGATGTCTACATGAAGGCAACTGCAACTGCAGGGCAGGAATCAAGCATAGTAACAGATTACATATTAAAGATTTTGGGGTTGGATATATGTGCTGATACTATGGTGGGAGATGAAATGTTGCGTGGTATCTCGGGAGGACAACGGAAACGTGTTACCACTGGAGAGATGTTGGTTGGACCAGCAAATGCACTTTTCATGGATGAAATATCAACAGGGTTGGACAGTTCCACAACTTTTCAGATTGTGAGCTCTCTGAGGCAATATGTTCACATTCTTAATGGAACCGCAGTTATATCTTTGCTCCAGCCAGCACCTGAGACTTACGATCTTTTCGATGACATTATCTTAATCTCTGATGGCTATGTTGTGTATCATGGACCTCGCGAATATGTTCTAGACTTTTTCGAATCTATGGGATTCAAATGTCCTGAGAGGAAAGGTGTTGCTGACTTCCTTCAAGAAGTAACTTCGAGAAAGGATCAAGCTCAGTATTGGGTCCGAAAAGATCAACCATACAGATTCGTAAACGAGGTTCAATTTGCTGAGGCATTTCAATCCTTCCATATCGGTAGGAAACTTGCAGATGAACTTGCAGTTCCATTTGACAAGTCTAAGAATCATCCAGCTGCATTAACCACTGAGAAGTATGGTATTAACAAAAAGGAGTTGTTAAAGGCTAACCTCTCAAGAGAGTATTTGCTTATGAAAAGGAACTCATTTGTTTACATCTTCAAGCTATGCCAGATTTTTGTCATGGCATTCATAGCATTTACGCTGTTTTTCCGAACTGAGATGCATCACGGCAATGTAACTGATGCTGGTGTTTACACTGGTGCTCTCTTTTTCACATTAGTCACAATTATGTTTAATGGAATGGCTGAGATTTCTATGACCATTGCCAAGCTTCCGGTTTTCTACAAGCAACGGGATCTTCTGTTTTATCCCTCATGGGCATATGCTATTCCTTCATGGATTCTCAAGATTCCTGTTACAATGGCTGAAGTTGCTGTTTGGGTATTTCTCACATACTATGTTATTGGATTTGATCCAAATGTTGGGAGGTTCTTCAAGCAGTACCTTATACTATTCTTTCTCAGCCAGATGGCTTCGGGATTATTCCGAGCTATTGCAGCATTGGGTAGAAACATGATTGTGGCTAATACATTTGGATCCTTTGCAGTTCTAACATTTCTTTCATTGGGTGGCTTTGTCATATCAAAAAAGGATATCAAGAGCTGGTGGATTTGGGGTTACTGGATCTCACCTCTGATGTATGGACAAAATGCTTTAATGGTCAATGAATTTCTTGGGAACAGTTGGCACAATTCTACTCACGATATAGGAGTCGATCTTCTGGAGAGCCGTGGCTTCTTCACACGTTCATATTGGTATTGGATAGGCTTTGGAGCATTGGTTGGGTTTGTGTTCCTTTTCAACATGTTGTTTGGTGTTGCTCTCGAATGGCTCGGCCCCTTTGATAAGCCACAAGCAACAATATCTGAAGAACCAGAAGAAACTACAGAAGTCGAACAAGAAGTCGAACTTCCACGCATAGAAAGTTCAGGAAGGGGTGTTGTTGTTGAGGGATCGAGCCACGGAAAGAAAAAAGGAATGGTGCTTCCTTTCGAACCACATTCTATCACCTTTGATGAAATCACATATTCTGTTGACATGCCACAAGAAATGAAAGAACAAGGTGTACAAGAGGACAAATTGGTGCTTTTGAATGGGGTTAGTGGTGCATTCAGGCCTGGAGTTCTCACAGCTTTGATGGGTGTAAGTGGAGCTGGTAAAACTACTTTGATGGATGTTCTCGCTGGTAGGAAAACCGGTGGTTATATTGATGGAAGCATAAAAATTTCTGGATACCCGAAAAAACAAGAAACGTTTGCTAGAATCTCTGGCTATTGTGAGCAGAATGATATCCACTCACCTCATGTTACAGTTTATGAGTCTTTGCTCTATTCAGCATGGCTCCGTTTATCCTCTTCAGTTGATTCCAATAAAAGAAAGATGTTCATTGAGGAAGTTATGGAACTTGTGGAGCTGAAGCCGTTGAGGAATTCATTGGTCGGATTGCCTGGTGTCAGTGGTCTTTCAACCGAACAACGCAAAAGGCTAACCATAGCAGTTGAATTAGTGGCTAATCCTTCCATAATATTCATGGATGAACCTACTTCTGGATTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTCAGGAACACAGTGGACACAGGAAGAACAGTTGTTTGCACCATCCATCAGCCTAGCATCGACATATTCGAAGCATTTGATGAGTTATTCCTAATGAAGCGTGGAGGACGAGAAATATATGTTGGGCCGCTTGGTCGTCACTCTACCCATTTGATCAAGTATTTCGAGAGCATTGAAGGAGTGAGCAAAATCAAAGACGGATATAACCCTGCAACTTGGATGTTGGAGGTTACAAGTACAGCACAAGAACTTAGCTTAGGTGCTGATTTTACTGAGATATACCAAAACTCTGATCTGTATAGGAGAAACAAACAGCTTATACAAGAACTGAGCCAACCTGCTCCCGGTTCAAAGGATCTATATTTCCCGACTCAATTCTCACAATCATTCTTGGTCCAATGTCAAGCCTGCTTATGGAAACAGCGTTGGTCATATTGGCGTAATCCACCATACACTGCTGTGAGGTTTTTCTTCACTACTTTCATAGCCTTGATGTTTGGAACAATGTTCTGGGACATCGGAACCAAAACCGCAAACATGCAAGACTTGTTAAATGCGGTCGGTTCGATGTATTCTGCTGTTCTCTTCCTTGGAGTGCAGAATTCTGCATCAGTACAACCAGTGGTAGCGGTTGAAAGAACCGTCTTTTATAGAGAAAAAGCTGCGGGAATGTACTCTGCTTTACCCTATGCATTTTCACAGATTCTAGTGGAGCTACCTTATATTTTTGCTCAAGCCGTGACGTATGATCTCATAGTCTATGCCATGATTGGATTTGAATGGACCGTAGCGAAATTCTTTTGGTCTCTATTTTTCATGTACTTCACATTGTGCTACTTTACCTTCTACGGTATGATGGCGGTTGCAGTTACACCAAATCACCATGTTGCTTCGATTGTGGCTGCCGCATTTTATGCAGTTTGGAATCTCTTCTCCGGATTTGTTGTCACCAGACCTAATATTCCTGTATGGTGGAGATGGTACTACTGGGCATGCCCTGTGGCCTGGACCATATATGGATTGATTGCATCACAATTTGGAGACATAGAAGACTTTATGGAATCCGAACAGAAGTCGGTGAAAGATTTCGTGGAAAGTTACTTCGGCATCAAGCATGACTTCATAGGAGTTACCGCGGTTGTGGTTCCTGGGATCGCCGTGCTCTTTGCATTCATTTTTGCTGTTGGTATCAAGGTCTTTAACTTCCAAAAGAGATAG 4281 0.4151 MDGSDIYRASNSLRARSSTVWRDSGVEVFSKSTREEDDEEALKWAALEKLPTYNRLRKGLLTTSHGAASEIVVTDLAHQERQKLLDRLVKVAEEDNEKFLLKLRERVDRVGLDIPTIEVRYEHMKIEAEAFVGGRALPSFINSATNVIEGLLNLLHIIPTKKKHVTILKDVSGIIKPRRMTLLLGPPGSGKTTLLLALSGKLDPSLQVTGKVTYNGHEMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLSELSRREKAANIKPDPDIDVYMKATATAGQESSIVTDYILKILGLDICADTMVGDEMLRGISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSSLRQYVHILNGTAVISLLQPAPETYDLFDDIILISDGYVVYHGPREYVLDFFESMGFKCPERKGVADFLQEVTSRKDQAQYWVRKDQPYRFVNEVQFAEAFQSFHIGRKLADELAVPFDKSKNHPAALTTEKYGINKKELLKANLSREYLLMKRNSFVYIFKLCQIFVMAFIAFTLFFRTEMHHGNVTDAGVYTGALFFTLVTIMFNGMAEISMTIAKLPVFYKQRDLLFYPSWAYAIPSWILKIPVTMAEVAVWVFLTYYVIGFDPNVGRFFKQYLILFFLSQMASGLFRAIAALGRNMIVANTFGSFAVLTFLSLGGFVISKKDIKSWWIWGYWISPLMYGQNALMVNEFLGNSWHNSTHDIGVDLLESRGFFTRSYWYWIGFGALVGFVFLFNMLFGVALEWLGPFDKPQATISEEPEETTEVEQEVELPRIESSGRGVVVEGSSHGKKKGMVLPFEPHSITFDEITYSVDMPQEMKEQGVQEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSIKISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSSSVDSNKRKMFIEEVMELVELKPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREIYVGPLGRHSTHLIKYFESIEGVSKIKDGYNPATWMLEVTSTAQELSLGADFTEIYQNSDLYRRNKQLIQELSQPAPGSKDLYFPTQFSQSFLVQCQACLWKQRWSYWRNPPYTAVRFFFTTFIALMFGTMFWDIGTKTANMQDLLNAVGSMYSAVLFLGVQNSASVQPVVAVERTVFYREKAAGMYSALPYAFSQILVELPYIFAQAVTYDLIVYAMIGFEWTVAKFFWSLFFMYFTLCYFTFYGMMAVAVTPNHHVASIVAAAFYAVWNLFSGFVVTRPNIPVWWRWYYWACPVAWTIYGLIASQFGDIEDFMESEQKSVKDFVESYFGIKHDFIGVTAVVVPGIAVLFAFIFAVGIKVFNFQKR* 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2078 1426 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 828 1080 IPR003439 GO:0005524
Lan6g2078 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 850 1065 IPR027417 -
Lan6g2078 1426 Gene3D - 153 462 IPR027417 -
Lan6g2078 1426 Gene3D - 841 1073 IPR027417 -
Lan6g2078 1426 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1426 - -
Lan6g2078 1426 SMART AAA_5 177 410 IPR003593 -
Lan6g2078 1426 SMART AAA_5 865 1057 IPR003593 -
Lan6g2078 1426 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1426 - -
Lan6g2078 1426 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Lan6g2078 1426 Pfam Plant PDR ABC transporter associated 722 780 IPR013581 -
Lan6g2078 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Lan6g2078 1426 CDD ABCG_PDR_domain2 825 1063 IPR034003 -
Lan6g2078 1426 CDD ABCG_PDR_domain1 150 407 IPR034001 -
Lan6g2078 1426 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Lan6g2078 1426 Pfam ABC-2 type transporter 1154 1367 IPR013525 GO:0016020|GO:0140359
Lan6g2078 1426 Pfam ABC-2 type transporter 383 436 IPR043926 GO:0140359
Lan6g2078 1426 Pfam ABC transporter 856 1008 IPR003439 GO:0005524
Lan6g2078 1426 Pfam ABC transporter 168 350 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2078 Lan-Chr6 31373124 31380143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2078 K08711 - gmx:100793825 2529.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2078 6 31373124 31380143 Lan2g0452 2 4946863 4954600 PCT
Lan2g0452 2 4946863 4954600 Lan6g2078 6 31373124 31380143 PCT