Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2022 ATGGGTGAGGCTCCAGAGATTTTCTACGTCAATGGTTTCTCAAAGTTCATTCATGAAACTCAACAAAACCAATGCAGTGATAAGAACCATGATACTTCCTGGTACGAGGAAATCATCGATGATGATCTCAAATGGTCTTATAAACTCAACAGTGTGCTCCATAAAGGAATTAGCGAGTACCAGGAGATAGCTCTGTTAGATACAAAGCGTTTTGGAAAGGCATTGGTGATTGATGGAAAGATGCAGAGTGCTGAAACGGATGAGTTCATTTATCATGAATGTTTGATTCATCCCTCTCTTTTATCTCACCCCAATCCCAAAAGAGTGTTTATAATGGGAGGAGGTGAAGGTTCTACTGCCAGAGAAGCCCTCAAACACAAGTCAATAGACAAAGTTGTCATGTGTGATATAGACCAGGAGGTTGTAAGTTTCTGCCGAAAATACTTGGTTGTAAACAAAGAAGCATTTTCTCATAAGAAACTCGAACTTGTCATCAATGATGCCAAGGCTGAATTAGAGAAGAGAAAGGACAAGTTTGATATCATTGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTCTATGAGAAAATCTTGAAACCCAAGCTCAATGACAATGGAATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAGGAAGTCTTCACTTCTATATACAACACAATCAAACAGGTCTTCAAATATGTGAAGGTATACTCAACTCATGTACCATCTTTTGCAGATACATGGGGATGGGTTATGGCTTCAGATCAACCACTATCCATTGGCTCTGAGGAAATGGACAGAAGAATTGGAACAAGAGTGAATGATGAATTACTCTATCTAAATGGTGCTTGGTTTCACTCATCTTCCATCATGAATAAGATTGTGTCACTATCGCTTCAGAATGAAACTCACGTTTATACCGAAGAAAATGCTAGATTTATTCATGGACATGGTGTTTCTCATCATCTCTAA 1014 0.3955 MGEAPEIFYVNGFSKFIHETQQNQCSDKNHDTSWYEEIIDDDLKWSYKLNSVLHKGISEYQEIALLDTKRFGKALVIDGKMQSAETDEFIYHECLIHPSLLSHPNPKRVFIMGGGEGSTAREALKHKSIDKVVMCDIDQEVVSFCRKYLVVNKEAFSHKKLELVINDAKAELEKRKDKFDIIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVKVYSTHVPSFADTWGWVMASDQPLSIGSEEMDRRIGTRVNDELLYLNGAWFHSSSIMNKIVSLSLQNETHVYTEENARFIHGHGVSHHL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2022 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 33 308 IPR029063 -
Lan6g2022 337 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 32 269 IPR030374 -
Lan6g2022 337 Coils Coil 158 178 - -
Lan6g2022 337 PANTHER BNAA02G04280D PROTEIN 1 335 - -
Lan6g2022 337 Pfam Spermine/spermidine synthase domain 88 266 - -
Lan6g2022 337 Gene3D Spermidine synthase, tetramerisation domain 32 84 IPR037163 -
Lan6g2022 337 CDD AdoMet_MTases 108 221 - -
Lan6g2022 337 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 335 - -
Lan6g2022 337 Pfam Spermidine synthase tetramerisation domain 34 85 IPR035246 -
Lan6g2022 337 Hamap Polyamine aminopropyltransferase [speE]. 33 314 IPR001045 GO:0003824
Lan6g2022 337 Gene3D Vaccinia Virus protein VP39 85 336 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2022 Lan-Chr6 30959626 30963121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2022 K18787 - gmx:100784972 607.446