Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1859 ATGTCAAAGGACTGTGGCCACCATGATGAGGAGCGCCGCCAGCTCCTCCGCCGCATATTCGTCGGAATCACCACCTTCATCATCCTTATCCTCCTAATCATCTTCCTAATATGGATCATCCTCCAACCCTCCAAACCACACTTCATCATTCAAGATCTCACCGTTTACACCTTCAACCTCTCCTCCACCACCGCCACCGCCACCGAACCCTCTTTTTCCTCTCCCACCCCTAACACCCTCACCACCACCATGCAAGCCACGATCTCATCCTTCAACCCTAATGCACGCATTGGCATTTACTATCAAAAACTTGGTGTCTACGCTTCCTACCGCGGCCAACAGATTTCTAGCTACACGATGGTCCCGGTAACCTATCAGGGCCATCGTGAAGCTACTGTATGGTCGCCGTTCTTGTATGGCAACACCGTGCCGGTGTCGCCATACGTGTTGAGTTCTCTACAGCAAGATCAGGACGCAGGAGGGACTTTGGTGAACGTTAAGATAAACGGAAGAGTGAAGTGGAAGGTGGGGACTTGGGTTTCCGGGAGGTATCACATTGATGTGAACTGTCCGGCGTATATTACACTCGGCGGTGGCCGGAATAATGCTATCGGAGTAGCCACTGCGGTGATGAAGTTTCAGACTGATCAAACATGCAACGTTGATGTTTAG 672 0.5119 MSKDCGHHDEERRQLLRRIFVGITTFIILILLIIFLIWIILQPSKPHFIIQDLTVYTFNLSSTTATATEPSFSSPTPNTLTTTMQATISSFNPNARIGIYYQKLGVYASYRGQQISSYTMVPVTYQGHREATVWSPFLYGNTVPVSPYVLSSLQQDQDAGGTLVNVKINGRVKWKVGTWVSGRYHIDVNCPAYITLGGGRNNAIGVATAVMKFQTDQTCNVDV* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1859 223 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 7 223 - -
Lan6g1859 223 PANTHER OS05G0367900 PROTEIN 7 223 IPR044839 GO:0098542
Lan6g1859 223 Pfam Late embryogenesis abundant protein 87 190 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1859 Lan-Chr6 29727990 29728942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1859 13 190 EF-hand Containing Proteins AT5G21130 23.333 9.96e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1859 - - lang:109350847 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1859 6 29727990 29728942 Lan7g0391 7 2653724 2654539 PCT
Lan7g0391 7 2653724 2654539 Lan6g1859 6 29727990 29728942 PCT