Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1792 ATGAAGTTTATGAAGTTGGGTTCCAAACCTGATGCATTTCAAGCTGATCATGGAAACTCTCTCAGATATGTGTCATCTGAATTGGCTACAGATATTGTCATAACTGTTGGTGATGTTAAGTTTTACCTTCACAAGTTTCCTCTACTTGCCAAGAGCAATAGATTGCATAAGTTGGTATCAAAGGCTAATGAAGAGAACTGTGATGAAATTCTGTTGGATGATTTCCCTGGAGGGTCCAAGGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATGACTGTTACTCTCAATGCTTACAATGTTGTTGCTGCTCGATGTGCAGCCGAGTATCTTGAGATGAACAAAGATATCGATAGAGGAAACTTAATCTTTAAAATTGATGTGTTCCTTAACTCGAGTATCTTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTGTCATGGTCTGAAAATTTGAAGATAGTTGGGAGATGCATAGATTCCATAGCTACTAAAACTTCTGTGGACCCAGAAAACATCACTTGGTCTTACACTTATAACCGGAAATTGACTGAGCCTACTGATAAGATTGTTGAATTATCTCAAGAGAAAATTGAGCCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAGCTTGACATTGATCTTTATAAACGGATAATGATCACTGTGAAATCGAAGGGAAGAATGGATGATGTTGTGATTGCTGAAGCACTGAAAACATATGCAGTAAGATGGTTGCCTAATTCTATTGATGCCTTGGTTTCTGATGCGCATGCGTGGAGGAACAAATCTCTGGTAGAAACAATTGTCTTCTTATTGCCATGTGATAATGACAACGCGGTTTGTTCGTGTAGTTTCTTGTTGATGCTATTGAAAGTGGCCATAGTAGTCGAAGCTGACGAGTCGTTGAGTGAGTTATTGATGAAAAGCATTAGCCTAAAGTTGCACGAAGCTTGTGCCAAAGATTTACTGATTCCAGCAAGGTCTCCACAGACTACGACATACGATGTTGATCTGGTACAATGCCTTTTGAATCGATACATGTCAAATGAAAAGGAAAGTGGTGTTAAAGTAAATGGTGATTATATTCTAGCTCATGGCTCTTTATTGAATCTTGGCAAGCTTGTAGATGACTATCTTCGGGAAATTGCACATGATCCGAATCTTGGGCTCTCTAGTTTTGTTGGTTTGTCACAGTCAATTCCAGATTTTGCTAGACCAAATCATGATAGTCTGTACAGAGCCGTTGATCTCTACTTGGAGGAGCACCCAACCTTGACAAAAGCTGAAAAGAAGAAGATATGTGGACTGATTGATGTGAAGAAATTGACAATGGATGCATCAATGCATGCTGCTCAGAACGAACGCCTTCCGCTTCGAGTCGTAATGCAGGTTCTGTTTTTCGAACAGGTAAGAGCTTCTGCTGCCAACGCCCGAGCACTTAGTTACAATCGGCGCAATTCTTCTTCACACATTGCAATAAACGAAGACGAGGATTACAGCAACCATATTAGTCAATTAAAGATTAAAGATGAAGAGTTACAAAATAAGAACGGGAAATTGAATAAGAAGAATAGCAAAAACAGCCGAAGTGGCATGCAATTGTTGCCTTCAAGGTCGAGGAGAATATTTGACAAGTTATGGAGTGTTGGTAAAGGACAACAAGGAGAGAATAGATGCTCAGAGACTTCAGGGAGTTCTAATAGCCCAACAACTTCTGTAGTGGTTGGAGATACAAAATCATGTGGCTCATCCTTGAGACACAGAAGGTATTCTGTTTCTTAA 1809 0.3952 MKFMKLGSKPDAFQADHGNSLRYVSSELATDIVITVGDVKFYLHKFPLLAKSNRLHKLVSKANEENCDEILLDDFPGGSKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMNKDIDRGNLIFKIDVFLNSSIFRSWKDSIIVLQTTKSLLSWSENLKIVGRCIDSIATKTSVDPENITWSYTYNRKLTEPTDKIVELSQEKIEPVPKDWWVEDICELDIDLYKRIMITVKSKGRMDDVVIAEALKTYAVRWLPNSIDALVSDAHAWRNKSLVETIVFLLPCDNDNAVCSCSFLLMLLKVAIVVEADESLSELLMKSISLKLHEACAKDLLIPARSPQTTTYDVDLVQCLLNRYMSNEKESGVKVNGDYILAHGSLLNLGKLVDDYLREIAHDPNLGLSSFVGLSQSIPDFARPNHDSLYRAVDLYLEEHPTLTKAEKKKICGLIDVKKLTMDASMHAAQNERLPLRVVMQVLFFEQVRASAANARALSYNRRNSSSHIAINEDEDYSNHISQLKIKDEELQNKNGKLNKKNSKNSRSGMQLLPSRSRRIFDKLWSVGKGQQGENRCSETSGSSNSPTTSVVVGDTKSCGSSLRHRRYSVS* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1792 602 MobiDBLite consensus disorder prediction 562 602 - -
Lan6g1792 602 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 587 IPR029961 GO:0060918|GO:0099402
Lan6g1792 602 Coils Coil 512 532 - -
Lan6g1792 602 MobiDBLite consensus disorder prediction 561 602 - -
Lan6g1792 602 Pfam BTB/POZ domain 26 116 IPR000210 GO:0005515
Lan6g1792 602 SUPERFAMILY POZ domain 22 114 IPR011333 -
Lan6g1792 602 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Lan6g1792 602 Pfam NPH3 family 210 456 IPR027356 -
Lan6g1792 602 SMART BTB_4 30 128 IPR000210 GO:0005515
Lan6g1792 602 MobiDBLite consensus disorder prediction 523 544 - -
Lan6g1792 602 ProSiteProfiles NPH3 domain profile. 210 480 IPR027356 -
Lan6g1792 602 PANTHER OS12G0117600 PROTEIN 4 587 IPR043454 -
Lan6g1792 602 MobiDBLite consensus disorder prediction 529 544 - -
Lan6g1792 602 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1792 Lan-Chr6 29267319 29272047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1792 23 502 EF-hand Containing Proteins AT3G44820 32.689 2.82e-89 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1792 - - gmx:100809437 877.856