Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1780 ATGGTCATGGCTTCTAACAAGTTATTTTCCACAATTTTAATGCTTTCTCTTCTTGCTCATTCTTCAACATTAACCAATGCATGTGGCACATGCAACCCAACCAAACCTACACCAACTCCTAGTAAACAAAAGTGCCCAAATGACACATTGAAGCTTGGTGTTTGTGCTGATGTACTAGGACTTGTTAATGTTATTGTTGGTTCTCCTGCATCAAGTAAATGTTGTGCATTGCTTCAAGGTTTGACAAATTTGGAAGCAGCAATTTGTCTATGCACTGCTATTAAGGCTAATGTTGTTGGGATTAACTTGAATGTTCCTGTCTCTCTCACCTTGCTCCTTAGTGCTTGTCAAAAATCTGTCCCTTCTGGTTTCCAATGTGAATAG 384 0.3906 MVMASNKLFSTILMLSLLAHSSTLTNACGTCNPTKPTPTPSKQKCPNDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLTNLEAAICLCTAIKANVVGINLNVPVSLTLLLSACQKSVPSGFQCE* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1780 127 PANTHER - 3 127 - -
Lan6g1780 127 CDD HPS_like 43 126 IPR027923 -
Lan6g1780 127 Pfam Hydrophobic seed protein 45 126 IPR027923 -
Lan6g1780 127 PANTHER PROLINE-RICH PROTEIN DC2.15 3 127 - -
Lan6g1780 127 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 48 126 IPR036312 -
Lan6g1780 127 SMART aai_6 45 126 IPR016140 -
Lan6g1780 127 Gene3D - 41 127 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1780 Lan-Chr6 29100302 29101024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1780 34 126 Acyl Lipid Metabolism Gene Families AT4G22490 40.860 2.41e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1780 - - gmx:547594 179.489