Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1683 ATGGGGTTACATTCTCCTATGGCTAAGAGACTATGGAATGTGTTGAGGATCACATTCTTCATGATTAGGAAGGGTCTTATATCAAAGAGGAAGATGATTATGGATATAAATTTAATGATGAAAAAAGGGAAGGTTCTTAGAAAATCTCTAAGCAATCTCATTCATCTTAACCATAATCATTCCAAGAGCATCATGGGACGTGGTCGATTTGGGGTACAAGATTATGAGTTTTCTTGTAGTAACAGTCCAAATCCTGTTTTTTTGCAGATTCCAAAACGAAAGCACCATTTCAATTTCCCTTGTATTCATTCCCATGAGGTTTATGAAGAAGAACCTCATTTGTCAGCACTTGAAGAAGTTGAAAGTGTTGAGCCTATGACACTAGTTTTGGTGCCTAAGACCCCAGAATATGCCTTCAATTTTAGATTTGATGCATCTGATTTTGGTCATGGAGAGAAAAAGAGTCCACTTTTGTCACCATTTTCAGTTAGGATATCTAATTACTCAGCATTGGATGAAAATGAAGAGATTGTAAATGGTCAAGTTGATGATCAAGCTGAGGATTTCATCAAAAGGTTCTATGAACAGTTAAGGAAGCAAAGCCCCAAACAGTTACTATAG 621 0.3655 MGLHSPMAKRLWNVLRITFFMIRKGLISKRKMIMDINLMMKKGKVLRKSLSNLIHLNHNHSKSIMGRGRFGVQDYEFSCSNSPNPVFLQIPKRKHHFNFPCIHSHEVYEEEPHLSALEEVESVEPMTLVLVPKTPEYAFNFRFDASDFGHGEKKSPLLSPFSVRISNYSALDENEEIVNGQVDDQAEDFIKRFYEQLRKQSPKQLL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1683 206 Pfam Cotton fibre expressed protein 180 200 IPR008480 -
Lan6g1683 206 PANTHER OS01G0930500 PROTEIN 1 206 - -
Lan6g1683 206 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1683 Lan-Chr6 27566605 27567801 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1683 - - tcc:18601169 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1683 6 27566605 27567801 Lan8g1032 8 12334905 12351445 PCT
Lan8g1032 8 12334905 12351445 Lan6g1683 6 27566605 27567801 PCT