Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1632 ATGGCAACTAATGAGAATCTACCACCAAATGTAATAAAGCAACTTGCCAAGGAGTTGAAAAATCTTGATCAGTCCCCTCCAGAGGGCATCAAGGTTGCAGTAAATGATGATGATTTTTCTACAATATTTGCTGACATCGATGGTCCAGCTGGGACTCCTTACGAGAATGGAATTTTCCACATGAAGTTGTTACTGTCTCGTGATTTTCCACATTCTCCACCTAAAGGTTTTTTCTTAACAAAGATTTTCCATCCAAATATTGCAACCAATGGAGAGATTTGTGTCAACACACTTAAAAAGGATTGGAATCCTAGCCTTGGGTTACGGCATGTTCTTATTGTTGTTAGGTGTCTATTGATTGAGCCATTTCCAGAATCGGCTCTAAATGAGCAGGCAGGGAAATTGCTGCTTGAAGACTATGACGAGTATGCTAGACATGCCAGGCTTTACACTGGAATCCATGCAAAACCAAAGCCCAAATTTAAGAGCCGAGCTATATCTGAATCAACAACTGCTCTGAATGTTGGTCCTACAAACACCTCAGTGCTTAGTAATGAAATAAAAGCTGCGCCACCCGGTACTGCATTGCCATTGCCGTCCTCGTTAGCCCCCGCTACCACAGCAACAAGAGGAAATGATCAGGAACAAACACTTCCAACCGAGACAATTGTCAACGTTTCCGCTACTATAGTAAGTTCTGCTGCTGCATCACAGAAGAAGGAAGGTGGACAAGCAAAAATTCAGCCAGACAAGAAGAAGATAGATGCTAGAAAGAGAAGTTTGAAAAGATTGTAA 795 0.4189 MATNENLPPNVIKQLAKELKNLDQSPPEGIKVAVNDDDFSTIFADIDGPAGTPYENGIFHMKLLLSRDFPHSPPKGFFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKLLLEDYDEYARHARLYTGIHAKPKPKFKSRAISESTTALNVGPTNTSVLSNEIKAAPPGTALPLPSSLAPATTATRGNDQEQTLPTETIVNVSATIVSSAAASQKKEGGQAKIQPDKKKIDARKRSLKRL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1632 264 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 22-LIKE 4 258 - -
Lan6g1632 264 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 83 98 IPR023313 -
Lan6g1632 264 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 4 258 - -
Lan6g1632 264 CDD UBCc 12 151 IPR000608 -
Lan6g1632 264 SMART ubc_7 13 156 - -
Lan6g1632 264 MobiDBLite consensus disorder prediction 234 264 - -
Lan6g1632 264 SUPERFAMILY UBC-like 5 160 IPR016135 -
Lan6g1632 264 Pfam Ubiquitin-conjugating enzyme 15 150 IPR000608 -
Lan6g1632 264 MobiDBLite consensus disorder prediction 190 217 - -
Lan6g1632 264 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 156 IPR000608 -
Lan6g1632 264 MobiDBLite consensus disorder prediction 200 217 - -
Lan6g1632 264 Gene3D Ubiquitin Conjugating Enzyme 4 157 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1632 Lan-Chr6 25046785 25049826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1632 12 119 Miscellaneous Gene Families AT3G17000 29.825 4.74e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1632 K10583 - gmx:100801681 431.409