Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1532 ATGGAAGAGAATGGAGAAAGGAATAGTAGAAATGGTAGCTTCAAGTTAGGAGTGAAAGATGTAAAAATTCACACTGTGGTTGAGCTTAGTAGTGTGGACACACAAAATCTTCTTGTAGAAGAAGATAGAGAGAAAAAGAAAAAACCTTTCACAAAGAGAAAGAGTCTCTCACAAAGGGAAATGAAGTGTCTTGTTGCTATATGTGACACTCTCTTACCTTCAATTAAGGACCACTCAGTTGTTGTTGATGAATCTGTGGCTAATTTCTACCAAACTTCAGCTTCCATGGCTGGAACACCTCAGCTTATTGCAACATTGATAAGTGAGAAATTGCAACACCCAAATACATGGTTGTTGAGATTAACATTATGGCTACTATCAACATGGTTTGGAACATTGATACTATGTGGCATTTCAAGTTTCTCATTGAAGTTCCCTTTCTTTCATAGTTTCTCACAACTTTCTCTTCAAAAAAGACAACAAATTATGTTATCTTGGTCTCTTAGTTACTTTAATCTCCTTAGGATGTTCTTCAGAAGTGTCAAGCTTCTCACTCTACTTCTCTTCTTTACTCAGCTAGATGAAGCACAAAACAACCCATCATGGAGTGCAATTGGATATAGTGGACCTGATCCACAGTTCAAAGCACAATTGATGAACAATGATAATGATGATTATGCTGAAGAGATTATAGGTCCTCTTAACAAAGGCATTGTCCATCTGAATAACCCACCAAACATCATTGCAGACACACTAAGAAAATTTGGATTCCATGCATCTTTCACAACAAGAAAGCCTAAAGTTTCTTATAACTTGTCATATCCTTCTCTAGTTATCAAATGTGATGCTGTTGTTGTTGGTTCTGGCTCAGGAGGTGGTGTTGTGGCTGGTGTTCTAGCAAAAGCTGGTTACAAAGTACTTGTCTTAGAGAAAGGAAACTATTCTGCTAGGAACAATCTTTCACTTCTTGAAGGACCAACTTTGGATCAAATGTACCTCTCAAATGGGTTTCTTTCAACCGAAGATATGTCGGTATTATTGCTTGCAGGATCCACAGTTGGTGGAGGTTCTGCAATAAACTGGTCTGCATGTATTAAAACCCCTAAGCATGTTTGCAAAGAATGGTGTGGTAGGTATGAGTTAGAGTTATTTGAGAGTGAGTTATATGAAGAAGCTATGAATGTTGTGTGTGAGAAAATGGGTGTGCAATGTGAGATTGAAGAGGAAGGATTCAACAATGAAATATTGAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTTAGTAACATTCCGAGGAATGCTCCGAAAGATCATTACTGTGGTTGGTGTTGCTTGGGTTGTAAAGATGGGAAGAAAAAAGGTACATCAGAGACATGGCTTGTGGACTTAGTGAAATCAGGTAATGGTGCAATTCTAACTAGTTGTGAGGCTATTCAAGTTTTGCATAAGAGAAAGAAAGGGAGTGATAGAAAAATAGCAAGTGGAGTGAGTTTCGCAATTGAATACAAAGGGACTAAAGAGATTTGTGTTGTGGAGTCTAAGGTCACAATTGTAGCTTGTGGAGCACTTAGTACTCCATCATTGCTTAAAAGAAGTGGTTTGAGGAATGAAAACATAGGGAGATACTTGCATCTTCATCCTACAACAATGGCTTGGGGCTACTTCCCGGACTCGCCTTCAGCCGAGCTATGGCCGGAGAAAGATAAAAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCTACAGTTGTTGCAGATTTTGAGAAATCTGGATATGGTGCAGTGATCCAAACGCCTGCGTTGCATCCGGGTATGTTCTCGGTTCTAATGCCATGGACTTCAGGACTGGATATAAAAGATCGAATGCGCAAGTATTCTAGAACAGCTCATGTATTTGCACTAGCAAGGGATCAAGGATCAGGAATTGTGAACTCGCCTAACAGTATAAGTTATCAGATGAACGACGTCGACAAAGAGAATTTAAAGAAAGGAATTGAGAAGGTACTGAGAATTCTTGCAGCTGCAGGAGCCGAAGAAATCGGCACACATCATAACAAGGGAAGGAGGTTAAATGTGAAACAAGTAAGCTATAATGAATTTGAGAAATTTGTGCAAGAAGAAAGTTCGAGACCTTTAACAGACATTTCGACGCCGTTATGCTCAGCGCATCAGATGGGAAGCTGTAGGATGGGTAGCAATCCAAAGGAATCAGTCGTGAACCAGATCGGAGAGACATGGGAAGTTGAGGGCCTATTTCTTGCAGACACAAGTGTATTCCCTACAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAGGCCATTGCTTATTGCACTGCTCAATCTGTTCTTCAGGTTCTTAGAAGGAAAAGAACTTGGTGA 2379 0.3997 MEENGERNSRNGSFKLGVKDVKIHTVVELSSVDTQNLLVEEDREKKKKPFTKRKSLSQREMKCLVAICDTLLPSIKDHSVVVDESVANFYQTSASMAGTPQLIATLISEKLQHPNTWLLRLTLWLLSTWFGTLILCGISSFSLKFPFFHSFSQLSLQKRQQIMLSWSLSYFNLLRMFFRSVKLLTLLLFFTQLDEAQNNPSWSAIGYSGPDPQFKAQLMNNDNDDYAEEIIGPLNKGIVHLNNPPNIIADTLRKFGFHASFTTRKPKVSYNLSYPSLVIKCDAVVVGSGSGGGVVAGVLAKAGYKVLVLEKGNYSARNNLSLLEGPTLDQMYLSNGFLSTEDMSVLLLAGSTVGGGSAINWSACIKTPKHVCKEWCGRYELELFESELYEEAMNVVCEKMGVQCEIEEEGFNNEILRKGCQEMGYPVSNIPRNAPKDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILTSCEAIQVLHKRKKGSDRKIASGVSFAIEYKGTKEICVVESKVTIVACGALSTPSLLKRSGLRNENIGRYLHLHPTTMAWGYFPDSPSAELWPEKDKKSYEGGIMTAMSTVVADFEKSGYGAVIQTPALHPGMFSVLMPWTSGLDIKDRMRKYSRTAHVFALARDQGSGIVNSPNSISYQMNDVDKENLKKGIEKVLRILAAAGAEEIGTHHNKGRRLNVKQVSYNEFEKFVQEESSRPLTDISTPLCSAHQMGSCRMGSNPKESVVNQIGETWEVEGLFLADTSVFPTALGVNPMVTVQAIAYCTAQSVLQVLRRKRTW* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1532 792 Pfam GMC oxidoreductase 649 777 IPR007867 GO:0016614
Lan6g1532 792 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 28 791 - -
Lan6g1532 792 Gene3D - 273 591 IPR036188 -
Lan6g1532 792 PIRSF Lg_Ch_AO 41 791 IPR012400 GO:0046577
Lan6g1532 792 SUPERFAMILY FAD/NAD(P)-binding domain 278 783 IPR036188 -
Lan6g1532 792 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 28 791 - -
Lan6g1532 792 Pfam GMC oxidoreductase 282 548 IPR000172 GO:0016614|GO:0050660
Lan6g1532 792 Gene3D - 713 789 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1532 Lan-Chr6 22448419 22454774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1532 24 786 Acyl Lipid Metabolism Gene Families AT4G19380 58.885 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1532 K17756 - gmx:100778208 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0841 18 13770445 13777291 Lan6g1532 6 22448419 22454774 PCT
Lan6g1532 6 22448419 22454774 Lan18g0841 18 13770445 13777291 PCT