Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1519 ATGGGTACTTCAAATGATGCTGATTATGTAGCTATTGATGATTCACCATCTTCTCCAATGGAAAACAATAATAATGTGAGGAAAGTTTCTGTTCTTCCACTTGTATTTCTAATATTCTATGAAGTTTCTGGTGGACCCTTTGGTGTTGAGGATACTGTGCATGCAGCAGGTCCTCTTTTAGCACTTTTAGGGTTCTTGGTTTTTCCATTGATATGGAGTGTCCCTGAGGCTTTAATTACTGCAGAAATGGGTACAATGTTTCCTGAAAATGGTGGTTATGTTGTTTGGGTTTCATCTGCTTTAGGACCCTTTTGGGGGTTTCAACAAGGTTGGATGAAATGGTTAAGTGGTGTTATTGATAATGCTTTGTACCCAGTTCTGTTTCTTGATTATCTTAAATCAGGGTTCCCAGCACTAGGTGGAGGGGTTCCGAGAACGGTTTCGTCGTGGGGTTTGACTGTGTTTCTCACTTATTTGAACTATAGGGGTTTGCATATTGTAGGGTGGGTTGCTGTTCTTTTAGGGGTTTTCTCCCTTCTACCTTTTGTGGTTATGGGACTCTTGTCGATTCCGGACTTGAAACCTTCGAGATGGTATGTGACGGATCTCGATAATGTCGACTGGAATTTGTATTTGAATACTCTATTTTGGAATCTTAATTATTGGGATTCGATTAGTACTCTTGCTGGAGAAGTAGAAAATCCGAAGAAAACCCTTCCCAAGGCTCTTTTTTATGCTCTGATTCTAGTTGGTGTAGGGTATTTCTTCCCTCTTCTAATTGGCACCGGTGCTGTTCCCCTCGATCAGAAGTTGTGGACTGATGGGTACTTCTCGGATATCGCTATGATTGTTGGAGGAGTGTGGCTTAGATGGTGGCTTCAGGCTGCTGCTGCGATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGTAGTGATGCTTTTCAGCTTCAAGGCATGGCTGAGCGGGGATTGTTGCCCGAGTTCTTCGGCAAGAGATCTCGCTATGGAACCCCTCTTGTAGGAATACTCTTTTCAGCCTCTGGTGTAATTTTACTATCATGGCTGAGCTTTCAAGAAATCGTAGCTGCCGAAAATTTCTTGTACTGTTTCGGTATGATTTTGGAGTTCATTGCATTCATATGGTTGCGGATCAAACAGCCAAATGTGCATCGGCCGTACAAGATACCGGGGGGAACAGCTGGAGCAATTATTATGTGCATTCCTCCCACAATATTGATTTTTGTGGTAATGGCTTTCTCCACCTTAAAAGTAGTGGTTATAAGCCTCATTGCTATGATGATTGGCCTTGTTCTGCATCCTTTTCTTAAATTTCTCGAGAGAAAGAGATTCACGAAGTTCTCGGTCCGTCCTCATCTCCAACATTTTGACAATGAGGAGAGCACTTATTCTCTGGTAAATTAA 1422 0.4212 MGTSNDADYVAIDDSPSSPMENNNNVRKVSVLPLVFLIFYEVSGGPFGVEDTVHAAGPLLALLGFLVFPLIWSVPEALITAEMGTMFPENGGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGFPALGGGVPRTVSSWGLTVFLTYLNYRGLHIVGWVAVLLGVFSLLPFVVMGLLSIPDLKPSRWYVTDLDNVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKTLPKALFYALILVGVGYFFPLLIGTGAVPLDQKLWTDGYFSDIAMIVGGVWLRWWLQAAAAMSNMGMFVAEMSSDAFQLQGMAERGLLPEFFGKRSRYGTPLVGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFIAFIWLRIKQPNVHRPYKIPGGTAGAIIMCIPPTILIFVVMAFSTLKVVVISLIAMMIGLVLHPFLKFLERKRFTKFSVRPHLQHFDNEESTYSLVN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1519 473 PANTHER POLYAMINE TRANSPORTER PUT1 1 465 - -
Lan6g1519 473 PIRSF AA_transporter 10 466 - -
Lan6g1519 473 Pfam Amino acid permease 36 435 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lan6g1519 473 Gene3D Amino acid/polyamine transporter I 25 455 - -
Lan6g1519 473 PANTHER POLYAMINE TRANSPORTER PUT1 1 465 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1519 Lan-Chr6 22287012 22288818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1519 4 470 Organic Solute Cotransporters AT1G31830 73.348 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1519 - - gmx:100816567 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0818 18 13574142 13578024 Lan6g1519 6 22287012 22288818 PCT
Lan6g1519 6 22287012 22288818 Lan18g0818 18 13574142 13578024 PCT