Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1476 ATGGAAACTAGCTCAGTTTCTAAAGTGGTGTTTGCATTTTTCTTAGCTTTTTACTTGGGTTCTAACTTGATTAACTCAAGTGTCACTTATGATAGAAAAGCCATTATCATCAATGGCCAAAGGAGGATCCTTTTCTCTGGCTCCATACATTATCCTAGAAGTACCCCTGATATGTGGGAAGATCTGATTCAGAAAGGAAAAGAGGGTGGTTTAGATGTGATTGAAACTTATGTGTTTTGGAATGTTCATGAACCTTCTCAGGGCAATTATAATTTTGAAGGAAGATATGATCTTGTTAGATTCATAAAGACAATACAGAAAGCAGGACTTTATGCTCATCTTAGAATTGGACCTTATGTTTGTGCAGAATGGAATTTTGGAGGATTTCCTGTTTGGTTGAAGTATATTCCTGATATAAGCTTTAGAACAGACAATGAACCTTTCAAGAGAGCAATGCAAGGTTTCACTGAGAAGATTGTTGGAATGATGAAGAGTGAGAATCTCTTTGAATCCCAGGGTGGCCCTATTATACTATCTCAGATTGAGAATGAGTATGGAGCACAGAGTAAGTTACTAGGAGCAGCAGGACAAAATTATGTGAAATGGGCAGCAAAAATGGCAGTTGAGTTAGGAACTGGAGTGCCTTGGGTGATGTGCAAGGAAGATGATGCACCAGATCCAGTGATAAACACATGCAATGGCTTCTACTGTGATAAGTTCACTCCTAATAGACCTTATAAGCCTACACTTTGGACTGAGGCTTGGAGTGGCTGGTTTACCGAATTCGGAGGCCCGATACATAAAAGACCCGTACAGGATTTGGCATTTGCAGTTGCTCAATTTGTAACAAAAGGAGGATCATTTATAAATTACTACATGTATCATGGAGGGACGAATTTCGGACGAACAGCCGGAGGCCCTTTCATCACTACTAGCTATGACTATGATGCTCCACTAGATGAGTATGGTCTGATTAGGCAACCGAAATATGGTCATCTACAGGAGCTTCACAGGGCTATCAAAATGTGTGAGCGAGCTTTGGTTTCAGCTGACCCAATTGTTACTTCATTAGGAGAGTTCCAACAGGCCGATGTATACTATACGGAATCTGGAGATTGTGCTGCTTTTCTCTCAAATCATGATTCAAATTCCTCTGTTAGAGTGTTGTTCAATAATATGCATTATACTCTGCCTCCTTGGTCCATTAGCATTCTTCCCGATTGTAGAAACGTTGTCTTCAATACAGCAAAAGTTGGAGTGCAAACATCTCAGATGCAAATGATGCCAACAAATAATCAAATGTTCTTATGGGAGAGCGTCGATGAAGATATTACTTCTATGGATGACAGTGCAGTTACTGCTCCCGGTCTCTTGGAACAGATAAATGTGACACGAGATACAAGTGATTATCTTTGGTATATAACTAGTGTCGATATAGGTTCATCAGAATCTTTTCTACGCGGAGGAGAAACCCCGACTCTCGTTGTTCAGTCTACAGGCCATGCTGTACATGTTTTCATCAATGGCCAACTTTCTGGTTCTGCATTTGGAACGAGGGAGTATAGGAGATTCAAATACACGGACAAGGTAAACCTTCGGGCCGGAACAAACAGAATAGCTCTTCTCAGCGTTGCTGTTGGTCTTCCTAATGTCGGAGGACGTTATGAGACCTGGAACACAGGAATCTTGGGTCCAGTTGAAATCCATGGACTTGACCAGGGAAATTGGGACTTGTCCAGGCAGAAATGGACTTACCAGGTTGGGCTGAAAGGAGAGGCGATGAATCTTGTCTCTCCAAATGGTATCTCTTCGGTTCAATGGATGCAGTCAGCAATAGTCATAAAAAGAAACCAGCCATTAACATGGCACAAGACTTATTTCGATGCTCCGGATGGAGATGAACCGTTGGCATTGGATATGGAGAGTATGGGTAAAGGTCAAATATGGATTAATGGACAGAGTATTGGAAGATACTGGACAGCATTTGCTAATGGTAATTGCAACGGTTGTAACTATGCTGGAGGATTCAGGCCTCCAAAGTGCCAATTTGGTTGCGGCCAACCGACCCAGCGATGGTACCATGTACCTCGATCTTGGTTGAAACCAACTCAAAATCTACTTGTAATTTTTGAGGAACTCGAAGGAAACCCTTCAACGATTTCTCTTGTAAAGAGATCGGTGGGAAGTGTCTGTGCCGATGTGACGGAGTATCATCCGAATATTAAGAATTGGCACATTCAGAGCTATGGAAATGCGGAAAAGTTTCGTCCAGCAAAGGTTCGCTTGAATTGTAGCCCTGGTCAGATCATTTCTTCCATTAAATTTGCAAGCTTTGGAACTCCTTTCGGGACTTGCGGTAATTACAAGCAAGGAGTATGCCATTCTCCTACTTCCTATTCCATTTTGGAGAAGAAGTGTATAGGAAAAGCAAGATGTGCAGTGACTGTAACAAACAACATTTTTGGAGACCCATGTTCAAATGTCTTGAAGCGATTATCAGTAGAAGTTGTGTGCTCTTCAACCAATTCAAGGGTTTGA 2538 0.4173 METSSVSKVVFAFFLAFYLGSNLINSSVTYDRKAIIINGQRRILFSGSIHYPRSTPDMWEDLIQKGKEGGLDVIETYVFWNVHEPSQGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYIPDISFRTDNEPFKRAMQGFTEKIVGMMKSENLFESQGGPIILSQIENEYGAQSKLLGAAGQNYVKWAAKMAVELGTGVPWVMCKEDDAPDPVINTCNGFYCDKFTPNRPYKPTLWTEAWSGWFTEFGGPIHKRPVQDLAFAVAQFVTKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLIRQPKYGHLQELHRAIKMCERALVSADPIVTSLGEFQQADVYYTESGDCAAFLSNHDSNSSVRVLFNNMHYTLPPWSISILPDCRNVVFNTAKVGVQTSQMQMMPTNNQMFLWESVDEDITSMDDSAVTAPGLLEQINVTRDTSDYLWYITSVDIGSSESFLRGGETPTLVVQSTGHAVHVFINGQLSGSAFGTREYRRFKYTDKVNLRAGTNRIALLSVAVGLPNVGGRYETWNTGILGPVEIHGLDQGNWDLSRQKWTYQVGLKGEAMNLVSPNGISSVQWMQSAIVIKRNQPLTWHKTYFDAPDGDEPLALDMESMGKGQIWINGQSIGRYWTAFANGNCNGCNYAGGFRPPKCQFGCGQPTQRWYHVPRSWLKPTQNLLVIFEELEGNPSTISLVKRSVGSVCADVTEYHPNIKNWHIQSYGNAEKFRPAKVRLNCSPGQIISSIKFASFGTPFGTCGNYKQGVCHSPTSYSILEKKCIGKARCAVTVTNNIFGDPCSNVLKRLSVEVVCSSTNSRV* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1476 845 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Lan6g1476 845 SUPERFAMILY Galactose-binding domain-like 402 572 IPR008979 -
Lan6g1476 845 PANTHER BETA-GALACTOSIDASE RELATED 4 834 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 Gene3D - 414 570 - -
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Lan6g1476 845 Pfam Galactose binding lectin domain 762 838 IPR000922 GO:0030246
Lan6g1476 845 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Lan6g1476 845 SUPERFAMILY Galactose-binding domain-like 582 744 IPR008979 -
Lan6g1476 845 Gene3D - 751 845 IPR043159 -
Lan6g1476 845 Gene3D Glycosidases 23 344 - -
Lan6g1476 845 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Lan6g1476 845 PANTHER BETA-GALACTOSIDASE 3 4 834 - -
Lan6g1476 845 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Lan6g1476 845 Gene3D - 593 731 - -
Lan6g1476 845 ProSiteProfiles SUEL-type lectin domain profile. 759 839 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1476 Lan-Chr6 21607502 21614477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1476 5 843 Glycoside Hydrolase AT4G36360 76.603 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1476 - - gmx:100814111 1530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1476 6 21607502 21614477 Lan6g1476 6 21607502 21614477 ECH