Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0498 ATGGCACTCAGCAACAATGTCATAGGAGCCATAAACTTCATTGCTGTGCTCGTCTCAATCCCAATCATAGGTGCTGGAATCTGGCTAACAAATGGTGCCGCTGATTCATGTGTCAAGTTTCTACAATGGCCTCTAATCATCTTAGGGGTTCTGATCTTGATTGTAGCTCTGGCAGGTTTCATTGGGGCCTTTTGGAGAATCCAATGCCTCCTCATATTTTACCTCATTGCCATGCTAGTGCTTATCATACTGTTGGTTTGTTTGGTGGTTTTTGTGTATATGGTCACCATTAGAGGCCATGGAACCATAGAACCTAACCGTGCTTACTTGGAATATCATATGGATGACTTCTCTGGCTTTCTTCGTCGGAGGGTTAGAAGTTCTTTCAAGTGGGATGGTATTAGAAGCTGTCTTAGCCAAACAAATATGTGTGCTGAGTTAAACCAAAGTTTCAGAATGGCTCAGGACTTTTTTAATGCACATCTAACTCCTATGCAGTCAGGGTGCTGCAAGCCCCCAACACAATGTGGGTACACATTTGTGAATCCAACCTATTGGATTAGTCCCATCAACATAGCAGAAGATATGGATTGCCTACAATGGAACAACGACCAAACCCAACTTTGCTACGCTTGTGACTCATGCAAAGCTGGCTTATTGGCAAATCTTAGAAAGGAGTGGAAAAGAGCTAATGTGATATTAATCATCACTGTTATTGTTCTAATAGCAGTATATATAATAGGGTGCTGTGCCTTTAGGAATGCCAAAACTGAGGATCTATTTCGCAAATACAAACAAGGCTATACTTGA 810 0.4173 MALSNNVIGAINFIAVLVSIPIIGAGIWLTNGAADSCVKFLQWPLIILGVLILIVALAGFIGAFWRIQCLLIFYLIAMLVLIILLVCLVVFVYMVTIRGHGTIEPNRAYLEYHMDDFSGFLRRRVRSSFKWDGIRSCLSQTNMCAELNQSFRMAQDFFNAHLTPMQSGCCKPPTQCGYTFVNPTYWISPINIAEDMDCLQWNNDQTQLCYACDSCKAGLLANLRKEWKRANVILIITVIVLIAVYIIGCCAFRNAKTEDLFRKYKQGYT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0498 269 PRINTS Transmembrane four family signature 6 29 - -
Lan6g0498 269 PRINTS Transmembrane four family signature 38 64 - -
Lan6g0498 269 PRINTS Transmembrane four family signature 65 93 - -
Lan6g0498 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016021
Lan6g0498 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
Lan6g0498 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0498 Lan-Chr6 4161421 4163513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0498 1 269 Miscellaneous Gene Families AT5G46700 71.747 3.10e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0498 - - gmx:100795775 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0764 18 13095048 13096830 Lan6g0498 6 4161421 4163513 LSH