Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0456 ATGTCGTCGAAGGTTGTTTATGAAGGGTGGATGGTGCGGTATGGCCGAAGAAAGATTGGGCGATCCTTCATCCACATGAGATACTTCGTGCTCGAGTCGCGGTTACTCGCTTACTATAAGAGGAAACCACAGGATAATCAGGTTCCTATTAAAACACTGCTAATAGATGGCAGCTGTAGAGTGGAGGATAGAGGCTTGAAGACTCATCATGGACATATGGTTTATGTTTTGTCGGTTTACAACAAGAAAGAAAAGTATAATCGAATTACGCAGATGGCAGCGTTTAACATTCAAGAGGCACTAATCTGGAAGGAAAAAATTGAGTATGTCATCGACCAGTGTATGCAGCATCAGGGAGCACAACCATCAAATGGTAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAATGGGAAGACAGCTTCTTCGTCAGACCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAGGATGAGGCTCATCCAAATTTATTAAGGAGGACAACAATTGGAAATGGTCCTCCAGAATCAATTTTTGACTGGACAAGGGAAATAGATTCAGATTTATCAAATCAGAATATCAGTAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAATGCGAAAATGGACTTCGCATCTTTGAGGAACTTCTTGAAGTTGATTACCTGCCTAGGAGCTGTAGTAGAGCCATGAAGGCAGTAGGTGTTGTGGAGGCCACATGTGAAGAAATTTTTGAGCTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCAACATGGTAGCTTAGTCGAGGAGGTGGATGGGCATACAGCAGTGCTTTATCACCGACTTCAGCTAGACTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGTTATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTCTATTTCGCTCTAGGGAACATGAGAATTGTAGTCCACAGCCAGGGTGTGTTCGGGCACATATTGAGAGTGGAGGGTTTAACATTTCCCCCTTGAAACCTAGAAACGGAAGGCCCAGGACACAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGCTGGGGTGTAGGTTACATGTCATCTTTTCAGCAGCACTGTCTCCGTCAAATGTTAAATTGTGTAGCTGGTTTACGTGAATGGTTCACCCAAACAGATGAAAGGAATGCTCCACCACGAATTCCTGTCATGGTTAATATGTCCTCAGCATCTGTCTCTTCAAAGAAGACTCTGAAGCCAAATGATTCTTCTGTTCATCCTCCTTCTCTCGATCAATTAAATTCCGCAAGCAGAAATTCTGCCTATCAGGATGAATATTCTGATGAAGATGAGGATTTTCAAATAGCGGAACCTGAGCAAGAGGCTTACCCAATTGACCATGAGAATGATGCCAGAAGAACAGTCTTGGAAGAAGAGCCTGCAGATGAAATTGACTTGTCTTCCTTTACGGGTAATTTACGACGTGATGATCGTGATAATGCTCGTGATTGCTGGAAAATTTCTGATGGAAATAACTTCAGAGTCAGAAGCAAGCATTTTTGCTATGACAAGTCTAAGGTTCCTGCGGGCAAACATCTACTGGATCTTGTTGCTGTTGATTGGTTGAAGGACTCAAAAAGAATGGACCATGTGGCTAAGTGTCATGGTTGTGCAGCACAAGTTGCATCAGAAAAAGGATTTTTCTCCATTATCATTAATCTTCAAGTGCCTGGATCCACACACTATAGTATGGTATTTTATTTTGTGACAAGGGAATTAGTTCCTGGGTCCCTCTTGCAACGCTTTGTTGATGGTGATGATGAATTCCGAAACAGTAGGTTGAAGCTCATCCCGTCAGTCCCAAAGGGCTCTTGGATTGTGCGCCAGAGTGTCGGGAGTACTCCTTGTATACTTGGAAAGGCAGTTGATTGCAACTATATTCGTGGTCCCAAGTATTTAGAAATTGATGTTGATATTGGTTCTTCTACTGTTGCTAATGGAGTTTTGGGGTTGGTTGTTGGTGTGATTACAACATTGGTGGTTGATATGGCTTTTCTTATACAGGCAAATACACCTGATGAGTTGCCCGAGAAGCTTATTGGAGCAGTTCGAGTCTCTCATTTAGAGCTCAAATCTGCCATAGTCCCAAAACTGGATCCGGATCCATCATGA 2190 0.4301 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGSCRVEDRGLKTHHGHMVYVLSVYNKKEKYNRITQMAAFNIQEALIWKEKIEYVIDQCMQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDEAHPNLLRRTTIGNGPPESIFDWTREIDSDLSNQNISNQAFSRKHWRLLQCENGLRIFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCSFQHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYMSSFQQHCLRQMLNCVAGLREWFTQTDERNAPPRIPVMVNMSSASVSSKKTLKPNDSSVHPPSLDQLNSASRNSAYQDEYSDEDEDFQIAEPEQEAYPIDHENDARRTVLEEEPADEIDLSSFTGNLRRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKVPAGKHLLDLVAVDWLKDSKRMDHVAKCHGCAAQVASEKGFFSIIINLQVPGSTHYSMVFYFVTRELVPGSLLQRFVDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCILGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVVGVITTLVVDMAFLIQANTPDELPEKLIGAVRVSHLELKSAIVPKLDPDPS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0456 729 CDD START 197 368 - -
Lan6g0456 729 ProSiteProfiles START domain profile. 205 367 IPR002913 GO:0008289
Lan6g0456 729 SUPERFAMILY PH domain-like 3 116 - -
Lan6g0456 729 Pfam START domain 230 370 IPR002913 GO:0008289
Lan6g0456 729 ProSiteProfiles PH domain profile. 4 112 IPR001849 -
Lan6g0456 729 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 511 714 IPR009769 -
Lan6g0456 729 MobiDBLite consensus disorder prediction 139 170 - -
Lan6g0456 729 Gene3D - 1 123 IPR011993 -
Lan6g0456 729 MobiDBLite consensus disorder prediction 151 165 - -
Lan6g0456 729 Gene3D - 205 405 IPR023393 -
Lan6g0456 729 PANTHER PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKE 4 726 - -
Lan6g0456 729 SUPERFAMILY Bet v1-like 189 369 - -
Lan6g0456 729 MobiDBLite consensus disorder prediction 418 458 - -
Lan6g0456 729 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 4 726 IPR045096 -
Lan6g0456 729 SMART START_1 185 397 IPR002913 GO:0008289
Lan6g0456 729 MobiDBLite consensus disorder prediction 418 448 - -
Lan6g0456 729 SMART PH_update 5 114 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0456 Lan-Chr6 3799574 3811921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0456 - - aprc:113868395 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0806 18 13482751 13497517 Lan6g0456 6 3799574 3811921 LSH