LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0331	ATGGCTACTTTACACGAAAGCTCTTCTTCTTCTTCTTCTTCTAAAAGGTGGCTTCCTCTTGAAGCTAATCCTGATGTCATGAACCAGTACCTTTGGGGGCTTGGGCTTCCACAGGATGAAGCTCAGTGCTTTGATGTTTATGGCTTAGATGAAGAACTTCTTCAAATTGTTCCAAAGCCTGTTTTGGCTGTGCTTTTTCTTTATCCCTTAACTACTCAGACTGAACAAGAGAGGTTGCAACAGAATAATGAAAAAAGGGAGTATAGCAGTAAAGTGTATTTTATGAAACAAACAGTGGGTAATGCTTGTGGTACAGTAGGTCTTCTTCATGCTCTTGGCAACATAACTTCTCAGATTAAGCTTGTTGAGGGGTCATTCTTGGATAACTTCTTTAAATCTACTGCAAGCTTGGATCCAATGCAGCGCGCAATATTTCTTGAGAATGATAGAGAAATGGAAGTTGCACATTCAGTGGCAGCAACTGCTGGTGATACAGAGGCAGCAGATAATGCAATTGCTCATTTCATCTGCTTTGCTTGTGTGGATGGGGAAATTTATGAGCTTGATGGAAGAAAGTCAGGGCCAATATCTCATGGTCCATCCTCACCAAGTACTTTGTTGAAGGATGCAGCTAAAGTCATGCAGAGCATGATCCAGAAAAATCCAGACTCCCTTAACTTCAATGTCATTGCGGTATCAAAAAATTCTGGGGATAGATATTGA	723	0.4094	MATLHESSSSSSSSKRWLPLEANPDVMNQYLWGLGLPQDEAQCFDVYGLDEELLQIVPKPVLAVLFLYPLTTQTEQERLQQNNEKREYSSKVYFMKQTVGNACGTVGLLHALGNITSQIKLVEGSFLDNFFKSTASLDPMQRAIFLENDREMEVAHSVAATAGDTEAADNAIAHFICFACVDGEIYELDGRKSGPISHGPSSPSTLLKDAAKVMQSMIQKNPDSLNFNVIAVSKNSGDRY*	241

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g0331	240	Pfam	Ubiquitin carboxyl-terminal hydrolase, family 1	17	218	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	CDD	Peptidase_C12_UCH_L1_L3	17	231	-	-
	Lan6g0331	240	SUPERFAMILY	Cysteine proteinases	15	235	IPR038765	-
	Lan6g0331	240	Gene3D	-	11	235	IPR036959	GO:0004843\|GO:0006511
	Lan6g0331	240	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	19	36	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	57	69	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	97	114	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	169	180	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	PRINTS	Ubiquitin C-terminal hydrolase (C12) family signature	185	195	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	12	236	IPR001578	GO:0004843\|GO:0006511
	Lan6g0331	240	PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	12	236	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0331	Lan-Chr6	2544259	2547266	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0331	K05609		-	gmx:100527718	392.119

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan18g0386	18	7317026	7322399	Lan6g0331	6	2544259	2547266	LSH