Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0316 ATGGCGGAATCGGTGGAGCTTCCGAGTCGTTTAGCGATTCTTCCATTCAGGAATAAGGTTCTTTTACCTGGTGCAATCATCAGAATTCGTTGCACTTCCCCAACTAGTGTGAAGTTGGTGGAACAAGAACTTTGGCAGAGAGAAGAGAAGGGGTTAATTGGCATCTTGCCGGTGCATGATGCTGCTGGAATTAAACCAGTGGGTCATTCTATATCCGAAGGTGTAGGTACTGATTCTCTAGACCAAAGCTCAAAAACTCAAGGTGGTTCATCAGATTCTCATAAACTTGATACCGAAAATCAGAATGACGTTCATTGGCATAGCAGAGGGGTTGCTGCTCGAGCATTACACTTGTCGAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATATATAGTTGTTCTTGAAGGTTTATGCAGATTTAGTGTCCAGGAATTAATCACAAGGGGAACATATCATACTGCAAGGATCTCTTCTCTTGAGATGATGAAGACCGAGATGGAGCGTGTGGAGCAAGACCCAGATTTCGTAATGTTATCTCGCAAATTCAAAGCAACCGCCATGGAGCTGATTTCTGTACTTGAGCAGAAACAAAAAACTGGTGGAAGGACAAAAGTTCTCTTGGAGACTGTTCCAGTTCACAAGTTAGCTGATATTTTTGTTGCTAGCTTTGAGATCAGTTTTGAAGAACAGCTCTGTATGTTGGATTCAGTTGATCTTAAAGTGAGGCTTTCAAAGGCAACTGAAATGGTTGATAGGCACTTACAGTCAATACGTGTAGCTGATAAAATTACACAAAAGGTTGAAGGACAGTTGTCAAAATCTCAAAAAGAGTTTCTTCTGCGCCAGCAGATGAGGGCTATAAAAGAGGAACTTGGTGATAATGATGATGATGAGGATGACCTGGCTGCCCTGGAAAGAAAGATGCAAAGTGCGGGAATGCCACAGGATATCTGGAAGCATGCACACAGAGAATTAAGGAGACTAAAAAAAATGCAGCCTCAGCAACCTGGGTATAGCAGTTCACGGGCTTACCTAGATCTTCTTGCTGATCTGCCATGGCAGAAGGCCAGCAAGGAGCGTGAACTAGACTTAAGAGCTGCACAGGAGCGCCTAGACAATGACCACTATGGTTTAGTGAAGGTCAAGCAACGAATAATTGAATACCTGGCTGTTCGCAAGCTTAAACCAGATGCAAAGGGTCCTGTGTTGTGCTTTGTTGGACCACCAGGTGTTGGTAAAACATCGTTGGCATCTTCCATTGCTGCTGCTTTGGGCAGAAAATTTGTGCGCATATCCCTTGGTGGTGTCAAGGATGAGGCTGATATTAGAGGGCACAGGAGAACATACATTGGAAGCATGCCTGGGAGGCTTATAGACGGACTAAAGAGGGTAGGTGTTTCCGATCCTGTCATGTTGCTTGATGAAATTGACAAGACAGGTTCTGATGTTCGTGGAGATCCAGCTTCAGCATTGCTGGAGGTGCTAGATCCAGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATATGATCTATCCAGGGTTATTTTTGTGGCTACAGCAAATAGGGCGCAGCCTATTCCACCACCGCTCCTTGACAGGATGGAGGTCATTGAGCTTCCTGGATATACATCCGAGGAAAAGCTCAAAATAGCCATGCGGCATTTGATTCCAAGAGTTTTGGACCAACACGGGTTGAGTTCTGAGTTTCTTCATATTCCAGAGGGGATGGTGAAACTTGTTATTCAAAGATACACTAGGGAAGCTGGAGTGCGAAATTTGGAGAGGAATTTAGCTGCCCTGGCTCGTGCTGCTGCAGTAAGCGTAGCAGAGCAAGAACAAGTAGTTCCATTGGACAAAGGGATGCAGGAACTTGCTACATCACTTCTGGAAAACAGACTTCCCAATGATGCTGAAGTTGAAATGGAAGTGATACCGATGGGTGTCAACAATCGTGACATTTCAAACACATTCAAGTTCGCCTCTCCAATTGTTATTGATGAAGCCATGCTTGAAAAAGTGCTTGGGCCTCCAAAGTTTGATAGCAAAGAAGCTGCAGAACGTGTTGCAAGCCCTGGGGTATCTGTTGGGTTGGTTTGGACTACTTTTGGTGGAGAAGTTCAATTTGTGGAGGCTACCGCAATGGTGGGGAAGGGGGAATTGCATCTTACTGGACAACTTGGTGATGTAATAAAAGAATCGGCTCAAATTGCACTAACATGGGTAAGGGCAAGAGCAGCTGATCTTAAGTTGGCTGCTGCGGAGGGCAATAATCTGTTGGAGGGCCGTGATGTACATATTCATTTTCCTGCAGGTGCTGTACCTAAAGATGGGCCTTCAGCTGGTGTGACTTTGGTCACAGCATTGGTATCACTTTTCAGTCAGAAAAGAGTGAGATCAGATACAGCTATGACTGGAGAAATGACATTGAGGGGTCTTGTACTACCTGTTGGTGGTATCAAGGATAAGATATTAGCTGCACATCGACATGGCATTAAGAGAGTCATCCTGCCTGAAAGGAACTCGAAAGACTTGGTTGAAGTACCACCATCAGTGCTGGCCAATTTGGAGATAGTGCTTGCAAAACGAATGGAAGATGTGTTAGAGCAAGCTTTTGAAGGTGGATGCCCTTGGAGACAACACTCTAAGTTGTAA 2664 0.4471 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVHDAAGIKPVGHSISEGVGTDSLDQSSKTQGGSSDSHKLDTENQNDVHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELITRGTYHTARISSLEMMKTEMERVEQDPDFVMLSRKFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLCMLDSVDLKVRLSKATEMVDRHLQSIRVADKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLAALERKMQSAGMPQDIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASKERELDLRAAQERLDNDHYGLVKVKQRIIEYLAVRKLKPDAKGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVSDPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPYDLSRVIFVATANRAQPIPPPLLDRMEVIELPGYTSEEKLKIAMRHLIPRVLDQHGLSSEFLHIPEGMVKLVIQRYTREAGVRNLERNLAALARAAAVSVAEQEQVVPLDKGMQELATSLLENRLPNDAEVEMEVIPMGVNNRDISNTFKFASPIVIDEAMLEKVLGPPKFDSKEAAERVASPGVSVGLVWTTFGGEVQFVEATAMVGKGELHLTGQLGDVIKESAQIALTWVRARAADLKLAAAEGNNLLEGRDVHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRHGIKRVILPERNSKDLVEVPPSVLANLEIVLAKRMEDVLEQAFEGGCPWRQHSKL* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0316 887 PIRSF Lon_proteas 1 637 IPR004815 GO:0004176|GO:0005524|GO:0006508
Lan6g0316 887 PIRSF Lon_proteas 651 878 IPR004815 GO:0004176|GO:0005524|GO:0006508
Lan6g0316 887 Pfam Lon protease (S16) C-terminal proteolytic domain 669 876 IPR008269 GO:0004176|GO:0004252|GO:0006508
Lan6g0316 887 Gene3D - 544 683 - -
Lan6g0316 887 Gene3D - 304 352 - -
Lan6g0316 887 SMART AAA_5 400 545 IPR003593 -
Lan6g0316 887 Gene3D - 694 880 IPR014721 -
Lan6g0316 887 TIGRFAM lon: endopeptidase La 13 875 IPR004815 GO:0004176|GO:0005524|GO:0006508
Lan6g0316 887 MobiDBLite consensus disorder prediction 72 104 - -
Lan6g0316 887 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 887 - -
Lan6g0316 887 CDD AAA 385 546 - -
Lan6g0316 887 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 408 427 - -
Lan6g0316 887 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 695 711 - -
Lan6g0316 887 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 777 796 - -
Lan6g0316 887 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 807 826 - -
Lan6g0316 887 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 830 848 - -
Lan6g0316 887 Gene3D - 162 296 - -
Lan6g0316 887 Gene3D - 1 161 IPR046336 -
Lan6g0316 887 MobiDBLite consensus disorder prediction 75 95 - -
Lan6g0316 887 Gene3D - 365 543 IPR027417 -
Lan6g0316 887 Pfam ATPase family associated with various cellular activities (AAA) 404 541 IPR003959 GO:0005524|GO:0016887
Lan6g0316 887 SMART lon_5 10 253 IPR003111 -
Lan6g0316 887 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 887 IPR027501 GO:0004252|GO:0006515
Lan6g0316 887 SUPERFAMILY PUA domain-like 10 252 IPR015947 -
Lan6g0316 887 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 780 788 IPR008268 GO:0004176|GO:0004252|GO:0006508
Lan6g0316 887 SUPERFAMILY Ribosomal protein S5 domain 2-like 695 874 IPR020568 -
Lan6g0316 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 619 IPR027417 -
Lan6g0316 887 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 253 IPR003111 -
Lan6g0316 887 ProSiteProfiles Lon N-terminal domain profile. 11 253 IPR003111 -
Lan6g0316 887 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 887 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Lan6g0316 887 Coils Coil 288 308 - -
Lan6g0316 887 ProSiteProfiles Lon proteolytic domain profile. 692 877 IPR008269 GO:0004176|GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0316 Lan-Chr6 2445730 2455791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0316 K01338 - gmx:100796650 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0316 6 2445730 2455791 Lan6g0936 6 8760100 8771963 PCT