Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1271 ATGGCGCCTAGTCGGAGAAAGGGCCTAGGTAAAGCAGCAACCGCCGCCGCTGCCGCCGCCGCTTGCCGCCAATGGAAGGTTGGGGATCTTGTACTCGCCAAAGTGAAGGGGTTTCCTGCTTGGCCTGCCACTGTAAGTGATCCAGAGAAGTGGGGTTATTCCAAGGATTCAAAGAAAGTGCACGTTTATTTCTTTGGAACCCAACAAATAGCTTTCTGCAATCCTGCTGATGTTGAAGCATTTACTGAAGAGAAGAAACAGTCTCTTGTCAAACGTCGAGGAAAGGGTGCTGATTTTGTTCGTGCAGCACAGGAGATTATTAATAGCTATGAAAAATTAAAAGGAGAGGCCCAAGTTAATGAAACCAACTCTGGCGGTGAAGTTGCTAATGCAAATGTCTCATATCTAGTTGACCCATCTGCCAACTTAGGGTTAAAGGATAAGACAGATGCTCCTTTGGCACTTGGTTCAATAACGAAATCTTTGAATTCTGGCAAGCATGATGAACTAGTTTGTGCAGCTGAGGATGGCTTAGCTGTTGAACAGGGGGATGAATCTTATAATAAAGAGCCATCATTGGAGGAACCTATTGCTAACCCTGTTGCAACTATGAGTGTAAAATCATCTCTGCCCGTTACTTATGCTCATCAAAAAAGATCTCCAGACTTGAGCCTACAGGTCTGTACAACCCAGAGAAATGCATCATTTCATAGACCACAGGTCCTTAACTTTGTTGGACCTTTTAGTGATGGTGGAAATAGTGCTGGTAACATATCAGTTGATGTTACCCAGAATGTGTCTGTAAGAAGGAATAAACATATCAGGAAATCACATGATCTTCTTGGTTGTGTTGATGCTGATTCCTCACCATTTGCCTCCAATGGTAGCATGAAGGGCAAGGGTTCTGAAATTCTTACAGTCGATTCGGAGGCCTTTAACACAGATGACGGAAGTACAATAGATTCTAATTTTAGACGTGAATACTCTGAGACTATGGAGAGCCCCAGAGGCGAAATTGGGTTGAATGGAGGGCTTGATCTTAAAATAAAGGCTGTAGTTAATAAGAAGAAAAGAAAGTCAAACATGAAAAGGGAAACTAAAGATGCTGCGGAGCCAACCATTAGACTAGAGGAGGAGGCCGGTTCTCAAAATGCCAGTCAAAGTTCGCAGAACGTGTGTGGATATTCAATAGAGAGGTGCTCTGAGCAAGAAGGAGATGAACATTTGCCCCTGTTAAAACGAGCCAGAGTCAGAATGGGTAATGCATCATCCATGGAGGCAGAACTCAATAGCGGGGTACAAGATCAGGAGAAAAGCTGTAAGGAAGAGACCACTATCTCTCCGCTGCAAATAGCCACATCCTTGAATTGTGAAAGTGGTACTCTTGTTTATGTAGACTTACCAGCACAGAATGGAGCCATGGGTAACATTTTTCCTTCAAAGTTATTAGCTCCAAATTCTGAAACTGGGTCTCAGGTTTGTAAGATTGAGAAAGATCAAATGTTTGGCTGCTCCATGGATGGCGAAGCTGCTTTACCTCCATCTAAACGTCTCCATCGTGCTTTAGAAGCTATGTCTGCCAATGCTGCTGAAGAAGGTCAAGCTTGCATGGAATCATCATCCTCTGCAATGATTTCAACAGAGAACAAGTTATCTAAAGAAGTAAATAAGCAATTCACCAAGTTTGAACATCATGGAGCTGGCAAGGATGTCCTCCAGGCTACTAGAGACCAAGTTGGTGAAGACATGGTTGATTCTGTGGTTGCTCAGACTGATAAAACTGATTCAAAATTTCAGTTACATGGAAAAGTTTCTCCTAATGTTCATGTGAAATATTGTGAAGTTGGAAGCAATCAAGATTCACCAGGTGCACCATTGCCACCACATGATGATAACAGTATAAGACCCGAGAACCATTCAAATGCATCTGATACATCAGAACAAAATGGAATAAATCATGATCCTATGGAATGTGCTTGTGAAGGAGGTAAGTTGTTACCTCAAAATATTATTGATGTGCCTCAGGACAAGGTTGTTGTCTGTGAGGATTCTCGGTGCTTAAAGCAAGCAGTTGGTGACAGCAGCAAAGTTGATGACATGTGTGAGGTTGTGAAAGAGGTAATATTTAAAGGACAGAAGGAGGATAGGAGTTCTGTTTCAATATCAAATGATTGTTCAGGTGAAAAGGGTAATTTAGGAATCCAGTCACAAGGATCACCCCCAAATACATCAGTTTGTAATGTTTCTACATCAAACAGTAGTAATATCCTTCAAAATAGAAGTTGTAGCCCTGATGTACACCAGAAGCAAACTTTATCTGGTCCTGTTGATGGATGGAAAGATGATTTTGTGGAAAATCAAGGGGTAAGGTTGATGGGGAAGTCAGCTGAAGCAAGACATGCTGCTTTGGTATACTTTGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGCCGAGCAACACGTATAGCTATCGACTGTGCAAAGTTTGGCATTGCAGCTAAGATTTTGGAAATTCTTGTCCACAATCTGGAAACTGAGTCAAGCCTGTGCCGGAGGGTGGATCTGTTATTTCTAGTTGATTCTATTGCTCAATGTTCCCGAGGTTTGAAAGGTGATGTTGGTGGAGTATATCTCTCTGCTATGCAATCAGTCCTGCCACGCCTAGTGTCTGCTGCTGCTCCTGCTGGAAGTGCTGCTCAAGAAAATCGCAGGCAATGTCTTAAGGTTTTAAGGCTTTGGTTGGAGAGAAGAATCCTACCAGAATCCATTATTCGCCATCATATCAGAGAACTAAACTCATATATGACTTCAGCTTCTGCAGGTGTCTATTCACGACGTACATTAAGAACAGAGAGGCCTTTTGATGACCCTGTTAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCCCGGATGCTTAAAGATGAAGATGAAGGGAGTGATTCCGATGGAGCGAACTTTGAGGCTGTCACGCCTGAGCATGATTCTGAAACTCCTGATATGCAAGAAACGTCTCATGTAATTGAAAAGCGCAGGCATGTATTGGAAGATGTTGATGGTGAACTTGAAATGGAAGATGTTGCCCCCTCTGTTGATATTAGATTGAATTCAACTTATAATGTTAATGGAGGAAATGCCACACCATTAGCGAAGAATACTCCTCTGATACAGGGGCGACCATCTACCCCACCCCCACCATCATCTCCTCCTCCTCCTCCACCACCACCACCACCACCACATCCTCCTCTACCTCCACTCCCACCTCCCTATGCATTGCATCTCGTGTCAGCTACCCCCAATCCATATCGTGCTGCAATTGATTCAAAATTTTATATGGATTCACAGACTCTGAAAGACAACACGCTCCTCTCCATAGCTGAACCATTGACTGCACCAAGAAATAGCCAACTTATAAATGATGCAGTGCAGCACAACATGCAGATGCAGATACCTAACTCCACATGCTCTTTTAATTCCTTCCCGGTACAATCATTGGCTAATTTTGATGGTGTTAGTATCCATAATAAAGGTTACCCATTACTGCCCCCTTACCATATTCCATCCAATCAATTTTCTTTTGTTAATGGAGAATGTGTGAAGCCTCCTCAGAGGGACGTTCCACCACCCTCTTCATACTCCAATAACCACTTTGTGCAGAGCAATAGCATGGAAAGAGAGAATTTCTATAACAATCATGAGAGATTAAGGCCACCTCCTCCATATCATCAAAGTGAGAGATGGAATGTTCCTGCACCATATTCTGGTCCTCAGTATCATCATGATAGAGGAGGCCCGCCAGCTCCTTATGGTTGTCATCCATGTGAACCAACTAGATTACCAGGCCATGTGTGGAGGTTTCCTCCTCCGCCTGCGGATGACAGGGACTATATGCCTTTTAGGCAACCCTAA 3960 0.4326 MAPSRRKGLGKAATAAAAAAACRQWKVGDLVLAKVKGFPAWPATVSDPEKWGYSKDSKKVHVYFFGTQQIAFCNPADVEAFTEEKKQSLVKRRGKGADFVRAAQEIINSYEKLKGEAQVNETNSGGEVANANVSYLVDPSANLGLKDKTDAPLALGSITKSLNSGKHDELVCAAEDGLAVEQGDESYNKEPSLEEPIANPVATMSVKSSLPVTYAHQKRSPDLSLQVCTTQRNASFHRPQVLNFVGPFSDGGNSAGNISVDVTQNVSVRRNKHIRKSHDLLGCVDADSSPFASNGSMKGKGSEILTVDSEAFNTDDGSTIDSNFRREYSETMESPRGEIGLNGGLDLKIKAVVNKKKRKSNMKRETKDAAEPTIRLEEEAGSQNASQSSQNVCGYSIERCSEQEGDEHLPLLKRARVRMGNASSMEAELNSGVQDQEKSCKEETTISPLQIATSLNCESGTLVYVDLPAQNGAMGNIFPSKLLAPNSETGSQVCKIEKDQMFGCSMDGEAALPPSKRLHRALEAMSANAAEEGQACMESSSSAMISTENKLSKEVNKQFTKFEHHGAGKDVLQATRDQVGEDMVDSVVAQTDKTDSKFQLHGKVSPNVHVKYCEVGSNQDSPGAPLPPHDDNSIRPENHSNASDTSEQNGINHDPMECACEGGKLLPQNIIDVPQDKVVVCEDSRCLKQAVGDSSKVDDMCEVVKEVIFKGQKEDRSSVSISNDCSGEKGNLGIQSQGSPPNTSVCNVSTSNSSNILQNRSCSPDVHQKQTLSGPVDGWKDDFVENQGVRLMGKSAEARHAALVYFEAMLGTLTRTKESIGRATRIAIDCAKFGIAAKILEILVHNLETESSLCRRVDLLFLVDSIAQCSRGLKGDVGGVYLSAMQSVLPRLVSAAAPAGSAAQENRRQCLKVLRLWLERRILPESIIRHHIRELNSYMTSASAGVYSRRTLRTERPFDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKDEDEGSDSDGANFEAVTPEHDSETPDMQETSHVIEKRRHVLEDVDGELEMEDVAPSVDIRLNSTYNVNGGNATPLAKNTPLIQGRPSTPPPPSSPPPPPPPPPPPHPPLPPLPPPYALHLVSATPNPYRAAIDSKFYMDSQTLKDNTLLSIAEPLTAPRNSQLINDAVQHNMQMQIPNSTCSFNSFPVQSLANFDGVSIHNKGYPLLPPYHIPSNQFSFVNGECVKPPQRDVPPPSSYSNNHFVQSNSMERENFYNNHERLRPPPPYHQSERWNVPAPYSGPQYHHDRGGPPAPYGCHPCEPTRLPGHVWRFPPPPADDRDYMPFRQP* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1271 1319 MobiDBLite consensus disorder prediction 730 750 - -
Lan5g1271 1319 SUPERFAMILY Tudor/PWWP/MBT 22 124 - -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 1075 1102 - -
Lan5g1271 1319 ProSiteProfiles CID domain profile. 798 939 IPR006569 -
Lan5g1271 1319 CDD HDGF_related 23 109 IPR035496 -
Lan5g1271 1319 PANTHER PWWP DOMAIN PROTEIN 542 1318 - -
Lan5g1271 1319 PANTHER PWWP DOMAIN PROTEIN 1 546 - -
Lan5g1271 1319 Pfam PWWP domain 28 110 IPR000313 -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 1005 1023 - -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 1057 1102 - -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 356 388 - -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 990 1023 - -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 1248 1281 - -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 1057 1074 - -
Lan5g1271 1319 SMART PWWP_4 25 82 IPR000313 -
Lan5g1271 1319 Gene3D - 804 944 IPR008942 -
Lan5g1271 1319 ProSiteProfiles PWWP domain profile. 27 84 IPR000313 -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 614 655 - -
Lan5g1271 1319 SMART 558neu5 805 936 IPR006569 -
Lan5g1271 1319 MobiDBLite consensus disorder prediction 638 652 - -
Lan5g1271 1319 Pfam CID domain 806 929 IPR006569 -
Lan5g1271 1319 Gene3D - 16 121 - -
Lan5g1271 1319 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lan5g1271 1319 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 546 - -
Lan5g1271 1319 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 542 1318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1271 Lan-Chr5 26353036 26361878 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1271 - - lang:109348483 2538.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1271 5 26353036 26361878 Lan8g0676 8 8953539 8963167 PCT
Lan5g1271 5 26353036 26361878 Lan20g0202 20 1334727 1353546 PCT
Lan8g0676 8 8953539 8963167 Lan5g1271 5 26353036 26361878 PCT
Lan20g0202 20 1334727 1353546 Lan5g1271 5 26353036 26361878 PCT