Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1265 ATGCGGTCGTTAATGAGTAATTTCCTGGACCAAGCTGGCGGCACCGCGGTGATAGACGGCGGTCTGGCGACGGAGCTGGAACGTCACGGCGCAGACCTGAACGATCCACTTTGGAGCGCCAAATGCCTGGTCTCATCATCTCACCTCATTCGGCAGGTACACCTTGATTACTTGGAAAATGGTGCAGATATTTTAATCACTGCTTCTTATCAGGCTACCATTCAAGGTTTTAAAGCAAAAGGGTTTTCCAATGAGGAAAGTGAAGCATTACTCAGAAAGAGTGTTGAAATTGCTTGTGAGGCACGCAATGTCTATAATCAAAAATGTGATGCATGCTCATACCCTTCCTCTGATACCATAATCCTTAAACACCGTTCCATACTAATTGCAGCATCAGTGGGGAGTTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGGATTATGGTGCTGCTATCACCGTCCAAACTCTTAAAGATTTTCATCGAAGGAGAGTTCAAATTTTAGCAGATTCAGGTGCTGACCTGCTTGCATTTGAAACAGTGCCAAATAAAATTGAAGCTCAGGCTTATGCAGAGCTTCTAGAAGAAGAGGACATAAAGATTCCAGCATGGTTTTCATTTAACTCAAAAGATGGAATTAATGTTGTTAGTGGTGATTCTTTACTGGAATGTGGCTCCATTGCTGAATCATGCAACAAAGTTGTTGCTGTTGGAATCAACTGTACCCCGCCTAGATTTATACACGACCTGATAGTATTGCTTAAGAAGGTCTCTACAAAACCAATTGTTATATATCCAAACAGTGGGGAAAATTATGACGCTGACCGAAAGGAGTGGGTGCAAAATACAGGTGTTACAAATGAAGATTTTGTCACATATGTAAACAAATGGTGTGAGGTAGGGGCTTCCCTTGTGGGTGGCTGTTGCAGGACAACACCAGCTACTACTAGAGGGATATACAGGACACTCTCCAAGCAGTAG 987 0.4336 MRSLMSNFLDQAGGTAVIDGGLATELERHGADLNDPLWSAKCLVSSSHLIRQVHLDYLENGADILITASYQATIQGFKAKGFSNEESEALLRKSVEIACEARNVYNQKCDACSYPSSDTIILKHRSILIAASVGSYGAYLADGSEYSGDYGAAITVQTLKDFHRRRVQILADSGADLLAFETVPNKIEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECGSIAESCNKVVAVGINCTPPRFIHDLIVLLKKVSTKPIVIYPNSGENYDADRKEWVQNTGVTNEDFVTYVNKWCEVGASLVGGCCRTTPATTRGIYRTLSKQ* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1265 328 Pfam Homocysteine S-methyltransferase 17 322 IPR003726 -
Lan5g1265 328 PANTHER ZGC:172121 3 327 - -
Lan5g1265 328 PIRSF BHMT 5 199 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lan5g1265 328 PIRSF BHMT 270 328 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lan5g1265 328 Gene3D - 5 323 IPR036589 -
Lan5g1265 328 ProSiteProfiles Homocysteine-binding domain profile. 4 325 IPR003726 -
Lan5g1265 328 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 3 327 - -
Lan5g1265 328 SUPERFAMILY Homocysteine S-methyltransferase 12 327 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1265 Lan-Chr5 26321965 26324781 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1265 K00547 - gmx:100790567 550.051