Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1245 ATGTCTTTCAGAGGGATCACTAGGCCAAATGCATCATCGGGCATGGGTGTTGCTGATCACAGCAAAAATGTGTTCATGGAATTGAAGCAAAAGAAGGTGTATCGTTATGTGATCTTTAAGGTAGATGAGAAGAAAAAGGAGATTGTTGTTGAAAAGACTGGTGGTGTGGCTGAGAGCTATGATGATTTCACTGCATCTTTGCCTGAGAATGATTGCAGATATGCTGTCTATGACTTTGATTTTGTCACTTCTGAGAACTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCTCCTTCAACATCTCGAATTCGTGCCAAGATGCTCTATGCCACAAGTAAAGACAGGATTAAACATGAGCTAGATGGTTTCCATTATGAAATCCAAGCCACTGATCCCACAGAAATGGATCTTGAAGTGCTCAGAGACCGTGCACATTGA 441 0.4127 MSFRGITRPNASSGMGVADHSKNVFMELKQKKVYRYVIFKVDEKKKEIVVEKTGGVAESYDDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRIKHELDGFHYEIQATDPTEMDLEVLRDRAH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1245 146 Pfam Cofilin/tropomyosin-type actin-binding protein 22 143 IPR002108 GO:0003779
Lan5g1245 146 SMART adf_2 19 146 IPR002108 GO:0003779
Lan5g1245 146 SUPERFAMILY Actin depolymerizing proteins 11 146 - -
Lan5g1245 146 Gene3D Severin 5 146 IPR029006 -
Lan5g1245 146 PANTHER COFILIN-RELATED 1 146 IPR017904 GO:0015629|GO:0030042
Lan5g1245 146 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 1 146 - -
Lan5g1245 146 CDD ADF_cofilin_like 13 145 IPR017904 GO:0015629|GO:0030042
Lan5g1245 146 ProSiteProfiles ADF-H domain profile. 14 146 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1245 Lan-Chr5 26229079 26231355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1245 K05765 - gmx:100819975 259.225