Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1238 ATGAACATCTTCACCAAGAAACCCACCTCCAAAGAGGCTCTTAGGGAGAGTAAACGAGAAATGGCAACAGCTACTAGAGGTATAGAGAGGGAAATTGGAGGATTACAATTGGAAGAAAAGAAGCTTGTTGCTGAGATAAAGAGAACTGCTAAGACAGGAAATGAGGCGGCCACTAAAGTTCTAGCTCGGCAGCTAGTCAGGCTTAGGCAACAAATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCGACTCACACGCAGGCAATGCATGCCCATTCTTCTGTTGCTGTTGGCATGAAAGGTGCTAGTAAGGCAATGGCAGCTATGAATAAGCAAATGGCACCTGAAAAGCAAGCAAAAGTTATGCTGGATTTCCAGAAACAATCGGCACAGATGGATATGACTACTGAAATGATGTCAGATGCTATAGATGATGCCATAGATGATGATGAAGCTGAAGAGGAAACTGATGAGCTCACAAATCAAGTCCTTGATGAAATTGGTGTGGATATTGCCTCACAGTTATCAACAGCTCCCAAAGGGAGAGTCAAAACAAAGAACACAGAAAATGTTGGCAGCTCCGGCATTGATGACCTTGAGAAGCGTTTGGCGGCTCTTAGAAACCCATAA 639 0.4413 MNIFTKKPTSKEALRESKREMATATRGIEREIGGLQLEEKKLVAEIKRTAKTGNEAATKVLARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGASKAMAAMNKQMAPEKQAKVMLDFQKQSAQMDMTTEMMSDAIDDAIDDDEAEEETDELTNQVLDEIGVDIASQLSTAPKGRVKTKNTENVGSSGIDDLEKRLAALRNP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1238 212 Gene3D - 4 181 - -
Lan5g1238 212 MobiDBLite consensus disorder prediction 181 197 - -
Lan5g1238 212 MobiDBLite consensus disorder prediction 177 212 - -
Lan5g1238 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Lan5g1238 212 MobiDBLite consensus disorder prediction 1 22 - -
Lan5g1238 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
Lan5g1238 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1238 Lan-Chr5 26190999 26194136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1238 K12192 - gmx:100306343 333.954