Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1203 ATGGATCTATCTCTTTCTAAGTTGCGTCACTCTCCTACTCATCTCTCACTCAATCTCCACCGTTCATCTCTTCCATCTCAATTATCCTCTTCTACCTTCATTTCCTTCAAATCTCTTCCACCACCACCAACGTCGTCGTTTAAGATCTCACCCATCAAAGCCTCACTAAACGACCCTGCGTTTCACAAACCCAACAAAAACACACTCTTCCAAACCCTAATTTCCCCAATCGTTGAAACCACCTGCGTCGTCATCGCCGCCACCGCGTTCTTCTTCGTCCGCCACATGCCCGTCGTCGCCGCCCCTCTCCCCCCGCTATCCACCGTCGCGTCTGAACAAAACATAGACGCCGCCGAAGAGAGCGAGAGAGTTCTCGAGTCGCGCTTGAGCGAAAACCCTAACGACATTGAAGCGCTTCGCAATCTCGTGCAGCTGAAAATCCGAGCACGCAAGGCAAACGAAGCGATTGAAGTCATTGAGCGCTTAATCGAGCTCGAGCCAGAAGAATTCGAATGGCCTTTGCTCAAAGCTAATATGCATGTTTATAATGATGATTATGAACTTGCACGCAACATGTTTGAGGAAATTCTCAACAGAGATCCGCTTCGCATTGAAGCGTATCATGGTCTTGTAATGGCGATTTCAGAGTCGAATCAGCCGTTGGATGGTCTGTTGGATAGGGTTGAGGAAGCAGCGGAGAATTGCAAGAAGGAAAAGAAATTTTCTGAGGTGAGAGATTTTAAGCTGTTGATCGCGCAAATTAAGGTCTTGGAGGGAGATTTTCCGGAGGCGCTGAATAATTATCAGGATTTGGTGAAGGAGGAACCGAGAGATTTTAGGCCTTACCTGTGTCAGGGTATCATATATACCTTGCTGAAGAAGAAAGATGAAGCTGAGAAACAGTTCCAAAAGTTCCAAAAACTTGTTCCGAAGAATCATCCAATTAGGGAGTATTTTGATGACAGCATGTTTTCAACCAAGTTTTTCTCTCGGAATTTTGAAACGGAAGGAGCAGGTGCTAGGAGCTGA 1029 0.4645 MDLSLSKLRHSPTHLSLNLHRSSLPSQLSSSTFISFKSLPPPPTSSFKISPIKASLNDPAFHKPNKNTLFQTLISPIVETTCVVIAATAFFFVRHMPVVAAPLPPLSTVASEQNIDAAEESERVLESRLSENPNDIEALRNLVQLKIRARKANEAIEVIERLIELEPEEFEWPLLKANMHVYNDDYELARNMFEEILNRDPLRIEAYHGLVMAISESNQPLDGLLDRVEEAAENCKKEKKFSEVRDFKLLIAQIKVLEGDFPEALNNYQDLVKEEPRDFRPYLCQGIIYTLLKKKDEAEKQFQKFQKLVPKNHPIREYFDDSMFSTKFFSRNFETEGAGARS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1203 342 Gene3D Tetratricopeptide repeat domain 110 240 IPR011990 GO:0005515
Lan5g1203 342 SUPERFAMILY TPR-like 128 319 IPR011990 GO:0005515
Lan5g1203 342 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 332 - -
Lan5g1203 342 Coils Coil 142 162 - -
Lan5g1203 342 Gene3D Tetratricopeptide repeat domain 241 320 IPR011990 GO:0005515
Lan5g1203 342 PANTHER BNAA03G17190D PROTEIN 11 332 - -
Lan5g1203 342 Coils Coil 225 245 - -
Lan5g1203 342 ProSiteProfiles TPR repeat profile. 136 169 IPR019734 GO:0005515
Lan5g1203 342 SMART tpr_5 279 312 IPR019734 GO:0005515
Lan5g1203 342 SMART tpr_5 170 203 IPR019734 GO:0005515
Lan5g1203 342 SMART tpr_5 245 278 IPR019734 GO:0005515
Lan5g1203 342 SMART tpr_5 136 169 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1203 Lan-Chr5 25972609 25974451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1203 - - lang:109348412 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0451 9 6772651 6773956 Lan5g1203 5 25972609 25974451 LSH