Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan5g1201 | ATGAAGAAACAACTGACAGGTATACGGAATGATTCTCCCTTACACTCGGCAATTCGATCTGGAAACTTAGAATTGGTGTTGGAAATGATCTCTGGAAAGGGAGATGAAGAATTAAGGAAGTTGTTTTCAAAGCAAAATAACTCTGGTGAAACTGCTTTATATATTGCTGCTGAAAATGGTCATCTTGATATATTGAAAGAATTGATCAGATACCATGATGTTGTGTTGGCTAGCATCAAAGCTAGAAATGGATTCGACGCATTTCACATTGCTGCTAAAAACGGGGAGTTGGAGATATTGAAGATCCTCATGGAGGCTATTCCTGAAGTTTCAATGACCGTTGATCAGTCAAACACTACTGCATTGCACACCGCTGCAGCACAGGGACATATTGAAGTGGTAAACTTTCTCTTGGAAAAAGGTAGCAGCCTTGTAACTATAGCAAAAAGCAACGGAAAAACTGTCTTGCATTCTGCTTCAAGAAATGGCCATGTCGATGTCATCAAAGCCCTTCTGATTAGCGAACCTGAAATTGCAACAAGAATTGACAAGAAGGGACAGACAGCACTCCATATGGCAGTTAAAGGACAAAATCTTGAGATGGTGGATGAGCTTGTGAAGTTGAATCCGTCTTCGGCTAATATTGTGGATGCCAAGGGGAATACTGCACTGCATGTAGCATCCAGGAAGGGTCGTCTACAGATTGTTCAGAAGCTACTAGATTGCAGAGGAATAGACACAGATGTTATTAATAAATCTGGAGAGACAGCTCTAGATACCGCAGAGAAAAATGGTCGCTCGGACATTGCCAGGTTTCTGCTAGCTAATGGAGCTCAAAGCGCAAAGTCCATCAAGTCACCTAATTCAAACACAGCCCTTGAACTCAAACGGACGGTAAGCGACATAAAAAGTGGTGTTCATAACCAACTGGAACACACAATGAAAACACAGAGACGTATGCAGGGCATAGCGAAACGACTCAACAAAATGCAGGCTGAGGGGCTTAACAATGCAATCAACTCCAACACTATTGTTGCTGTCCTCATTGCAACAGTTGCTTTTGCTGCCATATTTAATGTCCCAGGTCAATATCCAAATGACCAAACGAATCTCGCCCCAGGAATGTCTCCAGGTGAAGCAAATATTGCTCCAAATATTGGGTTCAAGATATTCATAATCTTCGACTCTAGTGCCCTCTTCATATCACTAGCTGTAGTGCTTGTGCAAACATCAGTGGTTGTTGTTGAGAGGAAAGCGAAGAAGCAGATGACGGCGGTTATAAACAAGTTAATGTGGTTGGCCTGTGTGCTAATTTCTGTGGCATTTCTTGCAATGTCATACATAGTTGTAGGGGATCAGAAATGGTTGGCTATAGCAGCAACAGTTATAGGAACAGTGATTATGGCAGCTACTCTAGGAACACTCTTTTATTGGGTTATTGCTCACCGACTTGAGGCCTCGAGGTTGCGGAGTCTTAGGACAACAATGAGCAGTAGACAGTCATTAACCATGTCAATGATGTCAGGTTCGGAAACTGAGCATCAGACAGTGTATGCAATATAA | 1563 | 0.4235 | MKKQLTGIRNDSPLHSAIRSGNLELVLEMISGKGDEELRKLFSKQNNSGETALYIAAENGHLDILKELIRYHDVVLASIKARNGFDAFHIAAKNGELEILKILMEAIPEVSMTVDQSNTTALHTAAAQGHIEVVNFLLEKGSSLVTIAKSNGKTVLHSASRNGHVDVIKALLISEPEIATRIDKKGQTALHMAVKGQNLEMVDELVKLNPSSANIVDAKGNTALHVASRKGRLQIVQKLLDCRGIDTDVINKSGETALDTAEKNGRSDIARFLLANGAQSAKSIKSPNSNTALELKRTVSDIKSGVHNQLEHTMKTQRRMQGIAKRLNKMQAEGLNNAINSNTIVAVLIATVAFAAIFNVPGQYPNDQTNLAPGMSPGEANIAPNIGFKIFIIFDSSALFISLAVVLVQTSVVVVERKAKKQMTAVINKLMWLACVLISVAFLAMSYIVVGDQKWLAIAATVIGTVIMAATLGTLFYWVIAHRLEASRLRSLRTTMSSRQSLTMSMMSGSETEHQTVYAI* | 521 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 117 | 149 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 185 | 207 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 48 | 70 | - | - | |
| Lan5g1201 | 520 | Gene3D | - | 1 | 146 | IPR036770 | - | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 185 | 207 | - | - | |
| Lan5g1201 | 520 | Gene3D | - | 147 | 321 | IPR036770 | - | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 117 | 144 | - | - | |
| Lan5g1201 | 520 | SUPERFAMILY | Ankyrin repeat | 13 | 278 | IPR036770 | - | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 83 | 105 | - | - | |
| Lan5g1201 | 520 | PANTHER | ANKYRIN REPEAT PLANT PROTEIN | 1 | 520 | - | - | |
| Lan5g1201 | 520 | SMART | ANK_2a | 253 | 282 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 219 | 249 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 48 | 77 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 185 | 215 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 117 | 147 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 9 | 38 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 83 | 112 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | SMART | ANK_2a | 151 | 180 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 48 | 70 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 151 | 172 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 253 | 279 | - | - | |
| Lan5g1201 | 520 | Pfam | Domain of unknown function | 333 | 449 | IPR026961 | - | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 83 | 115 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | PANTHER | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT | 1 | 520 | - | - | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 151 | 172 | - | - | |
| Lan5g1201 | 520 | Pfam | Ankyrin repeat | 151 | 172 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 219 | 252 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat region circular profile. | 219 | 241 | - | - | |
| Lan5g1201 | 520 | ProSiteProfiles | Ankyrin repeat profile. | 253 | 279 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | Pfam | Ankyrin repeats (3 copies) | 80 | 144 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | Pfam | Ankyrin repeats (3 copies) | 198 | 279 | IPR002110 | GO:0005515 | |
| Lan5g1201 | 520 | Pfam | Ankyrin repeats (3 copies) | 10 | 73 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan5g1201 | Lan-Chr5 | 25962949 | 25970107 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan5g1201 | 1 | 493 | Miscellaneous Gene Families | AT1G07710 | 67.206 | 0.0 | 621 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan5g1201 | - | - | gmx:100787392 | 833.558 |