Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1191 ATGGCGGCGATAACCCGCCTCATTAACCGCACCACTTCCTCTTCATTCTCTTATTTGGCGCGTAGATCCTTCACTCACGCGCCTCAACGCGTAGATCCAAAGGACAGGAACGTGCAGTGGGTTTTCTTAGGCTGTCCCGGCGTCGGAAAAGGCACCTACGCCACGCGCCTCTGTAATCTCCTCCGTGTTCCTCACATCGCCACCGGAGATCTCGTTCGCCATGAACTCTCCTCCAAAGGTCCCCTCTCTCAACAGTTATCTGAGATTGTAAATCAAGGTAAATTGGTGTCTGATGAAATTATTATAAATTTATTGAAAGCGAGGCTTGCTGCTGGTGAAGCTAAAGGCGAGTCAGGGTTTATTCTTGATGGTTTTCCTCGAACAATAAACCAAGCTGAAATATTGGAAGGGGTAACTGACATTGACTTGGTGGTCAATCTGAAGCTCGAAGAAGAAATACTGCTTGAGAAATGCCTTGGCAGGAGAATGTGCAGTGAGTGTGGAGGAAACTTTAATGTTGCCTCCATTAACATGAAGGGTGAAAATGGGCGCCCTGGGACGGTCATGCCTCCACTTCTTCCTCCAGCACATTGCATGTCAAAGCTCATTACTCGTGCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGTATTTACAACGAAACGAGCAAGCCTGTGGAGGAATTTTATCGTAGTAGAGGAAAATTATTGGAGTTTGACCTGCCCGGAGGAATCCCAGAATCTTGGCCAAAGTTACTTCATGCTCTTGATCTGGATGATTATGAGGAGAAGCAGTCTGCTGCAGCATAA 813 0.4711 MAAITRLINRTTSSSFSYLARRSFTHAPQRVDPKDRNVQWVFLGCPGVGKGTYATRLCNLLRVPHIATGDLVRHELSSKGPLSQQLSEIVNQGKLVSDEIIINLLKARLAAGEAKGESGFILDGFPRTINQAEILEGVTDIDLVVNLKLEEEILLEKCLGRRMCSECGGNFNVASINMKGENGRPGTVMPPLLPPAHCMSKLITRADDTEAVVKERLRIYNETSKPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALDLDDYEEKQSAAA* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1191 270 TIGRFAM adk: adenylate kinase 39 257 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lan5g1191 270 CDD ADK 39 241 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 PANTHER NUCLEOTIDE KINASE 21 270 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 Pfam Adenylate kinase 43 235 - -
Lan5g1191 270 PANTHER ADENYLATE KINASE 21 270 - -
Lan5g1191 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 257 IPR027417 -
Lan5g1191 270 ProSitePatterns Adenylate kinase signature. 120 131 IPR033690 -
Lan5g1191 270 Hamap Adenylate kinase [adk]. 38 258 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 Gene3D - 25 258 IPR027417 -
Lan5g1191 270 PRINTS Adenylate kinase signature 41 54 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 PRINTS Adenylate kinase signature 69 83 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 PRINTS Adenylate kinase signature 120 136 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 PRINTS Adenylate kinase signature 205 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan5g1191 270 PRINTS Adenylate kinase signature 222 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1191 Lan-Chr5 25905861 25909984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1191 K00939 - gmx:102666238 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1191 5 25905861 25909984 Lan11g1401 11 22234124 22237134 PCT
Lan11g1401 11 22234124 22237134 Lan5g1191 5 25905861 25909984 PCT