Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1178 ATGGATGCCAAGGCATTCAAAATCTACATATTTACTGGGTCTATAGCGAGACGTGTGTTCTTTCGCTTGATCATGCTTGTTTCTGCTGTTTCCATCGTTTCATTGCTCCGAGCAATGTCAAGTTTCGATCTTGCATCATTGGCACCCTTTAATGACTGCATTGCAGTATCGAATTCGCAATTCGAAAACGTTACTTCGAGCCCGGGTTCTTACTTGTTTCAAAGCAGGGTGCTTAGCACCTTCTGGGGTTCATTCGATTCGATGAATTGCGCGAAAGATGCAAACTTGACTGTGAATGTGGTCAATGAGTTAATGGGCAAGCAACTTTTGAATTATGCAGCAAAAAGCTTATGCATTGGAGAAGGTTCTTCAATGGCCATCATGGCAATGAAACAGTTAGGATTCTCCAGTGTTAGTGGTGTCCATAGACACAACCTTTTCTCCCTCATGCAAAAGAATATAGTGTATGAGCTTGATTACAAGGATGCTTCATTTGATTTTGTAGTATCTAGGGACCTTGACAAGGTTTCAGTTCCTGCATTGCTTGTACTTGAGGTTGAAAGAATCCTTAAGCCTGGTGGAATTGGTGCACTTCTTGTTAGTTCCACTGGTTCCAACTCCAATGATTTGATAAGATCTGCTACACCAGTTTCTTCACTGCTCAGATCTTCTAGTGTTGTGCATGTTGGTCATGTTGATCAACTTAACCTTGTTGTGTTCAAGAAAAGAGCTGAAAATGCAAGTGCTTTCTATCAATATAGCATTCCAGAAGATTGTCCAAGTCTCATTTTGACCAACCCTCTCATAGAGCTTATGGAGCCTCTTGTGAGTGAAAGACCAACAACTCCTGAGTATGAGAAAAGTGTCCCTTATTTGCCTAAGTTTGTGGATGTTTCTGCTAAGAAGAGGCTTGTGTATATTGATATTGGGGTAGGTGAACTTCTCAATGCAAATGTTAGTGATTGGTTTATTCCATCTTATCCCATTGATCAGAAGAAATTCAATGCATACTTTGTTCACTATAACACTTCAATCTTATTGTCCTATGTGAAGAGACCTGGTATCACATTTGTTTATCACCCTGGATTGGCTGGTAAGGTCAATGCAAGGCTCCATGATCCTGATGAAGAAGACATGGATCCATATGAAGGGGAGGATGAGTTTGATTTCCTTGCTTGGTTCCAAGAAACTGTGCATTATGCTGATTTTGTGGTTCTGAAAATGAATGCAGGGAAAGTTGAACTCAAGTTCCTTAAGGATGTTTTTGAGAGTGGAGCTATATGTTCTGTTGATGAGTTGTTTCTGAGGTGCCCTGAGAATGGAGGGAATGATGATGATAAAAACATGACCTATAAAACCTGCATGGATATCTACAAGGGTCTTAGAAGCAATGGTGTCTATGTGCATCAATGGTGGGGTGACTAA 1425 0.4063 MDAKAFKIYIFTGSIARRVFFRLIMLVSAVSIVSLLRAMSSFDLASLAPFNDCIAVSNSQFENVTSSPGSYLFQSRVLSTFWGSFDSMNCAKDANLTVNVVNELMGKQLLNYAAKSLCIGEGSSMAIMAMKQLGFSSVSGVHRHNLFSLMQKNIVYELDYKDASFDFVVSRDLDKVSVPALLVLEVERILKPGGIGALLVSSTGSNSNDLIRSATPVSSLLRSSSVVHVGHVDQLNLVVFKKRAENASAFYQYSIPEDCPSLILTNPLIELMEPLVSERPTTPEYEKSVPYLPKFVDVSAKKRLVYIDIGVGELLNANVSDWFIPSYPIDQKKFNAYFVHYNTSILLSYVKRPGITFVYHPGLAGKVNARLHDPDEEDMDPYEGEDEFDFLAWFQETVHYADFVVLKMNAGKVELKFLKDVFESGAICSVDELFLRCPENGGNDDDKNMTYKTCMDIYKGLRSNGVYVHQWWGD* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1178 474 Pfam Methyltransferase domain 155 195 IPR013216 GO:0008168
Lan5g1178 474 PANTHER PEPTIDE UPSTREAM PROTEIN 1 474 - -
Lan5g1178 474 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 156 200 IPR029063 -
Lan5g1178 474 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 474 - -
Lan5g1178 474 Gene3D Vaccinia Virus protein VP39 125 235 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1178 Lan-Chr5 25836517 25838258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1178 - - gmx:100783651 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0428 9 6196797 6198954 Lan5g1178 5 25836517 25838258 LSH