Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1174 ATGGATGCAGAGGCATCGAGCACTACTAACCACCTGCCTGGCTTTCTTCACCGGTCACTGCCTGCTGTTGTACCTACGCTTTTGATTTCAATAGGATATGTTGACCCTGGAAAGTGGGCGGCAATGGTTGAAGGTGGTGCACGGTTTGGATTTGGTTTGATGGCTTTCATGCTTATTTTCAATTTTGCTGCTATCTTCTGTCAGTACATATCTGCAAGGATTGGTATAATCACAGGAAAAGATCTTGCTCAGATTTGCAGCGATGAATATGATACATGGACATGCATGCTCCTTGGAATTCAAGCAGAAATTTCTATGATTATGCTAGATCTTAACATGATCTTGGGCATGGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCGCTTGTGTCTTTTTAACTGCTACTGGTGCTGTTTTTCATCTGCTTCTTGCTCTCCTCCTTGACATTAAGAAGGCAAAGATCGTAGGCCTGTATGTGACAGGCTTTGTATTGCTTTCTTTTGTACTTGGAGTACTTATCAATCAACCAGGAATTCCTTTATCCATGAATGGAGTACTAACAAAGTTGAATGGGGAGAGTGCATTTGTGCTAATGAGTCTTCTTGGAGCAACTCTTGTGCCTCATAACCTATACCTTCATTCCTCTGTTGTACAGTGGCATCAGGGACCAACTGATATTTCTAAGGAAGCCTTGTGTCATAACCATTTTTTGGCCATCTTATGCTTCTTCAGTGGTCTTTATTTGGTCAATAATGTGGTGATGAATGCCTCAGCAAATGAGTTCTATAGTACGGGTCTAGTTTTGCTTACTTTTCAGGACGCATTATCACCAATGGAGGTGTTGCGTAGCCCAATAGCTTTGTTTGCTTTTTTATTGATTCTGTTTCTTGCAAATCAAGCCACAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGTTGTCCATGGTTTCTTAAGATTGGATATTCCAGGTTGGCTTCATTATGCTACAATTAGAGTGATTGCCGTTCTGCCTGCCCTTTATTGTGTTTGGAGTTCTGGAGCTGAAGGGATTTATCAGCTAGTTATAGTCACTCAGGTTTTGGTAGCTCTGCAACTTCCATCTTCTGTGATTCCCCTTTTTCGAGTTGCTACATCTAGGTCAATAATGGGTGTACACAAGATCTCTCAGTTTGTGGAACTTTTAGCCTTGGTCATTTTTGTTGGGGTGCTTGGCTTGAATATTGTCTTTGTGGTAGAAATGGTATTTGGCAGTAGTGAATGGGTGGGTGATTTGAGATGGAATGCAGGGAATGGTGTATCTTCCTCATATTTAATTCTTTATGCTTCTGCTGTTGCCTCAATATGTTTCATGCTTTGGTTAGCTGTCACGCCTTTAAGATCTGCCAGTGTCCAGTTAGAAGCTCAGGTGTGGAACTGGGATACGCCAGAGACTGTATCAAATCAGCCAGTTGACGGTGAGGAGTCATATTTAACTGGAACAAAGCATCATGGAGTTACGTCGGTTCAGGTGAAGGATCCAGCACCAGCACCAGCTCTGACTCTAGAAAGGACCTTGGAGTACTCAGATGTAACAGTCCCACGTTTTCATCATGATATACCTGAAACTATAATGGAGCCTGATCTACATGTGAGTGCTGAAAAGGAGACTCAATCTACTACATCATTTCCTAGTTCCCCCAAATCTCTTGCTAAGGTGTCAGCTTCCACATCAGAGTCAGAGGCAGTATCAACTGTAGTTGATGAAGTTTCTGATTCTAGATCTGAAGACACCAAATGTGTAAAAATAGAAACAAGTGCCCCCGTTGGGAAGAGTGTGGAGTTTGTGGGAGATTCAAATGCTGAGAGGGATGATGATGATGATGTTGACTCATGGGAAACTGAAGAATCATCCAAAGTGGTCTCAGCAAGTGCCCCGTCTTCAACATCAGATGGCCCTGCATCATTCAGGAGTCTTAGTAGGAAAAGTGATGAAGGTGGGAATAGCATTGGAAGTCTTTCGAGGTTAGCAGGCTTAGGGCGCGCAGCAAGGCGTCAGCTGGCTGCTGTTCTTGATGAATTCTGGGGACAACTTTATGATTTCCATGGGCAAGCAACCCGGGAAGCAAAGGCTAAGAAACTTGATGCTTTGCTGGGAGGGGGAATTGATTCAAGATCCACTGGTTCCTTGCAGCAGGTGGATGCATGTGGAAAGGAATATTCTGAATACTCAGCATCTGTTGGAGGTAGAGCTTCTGACACTTCAATGAATTCTGGTCTATATGACTCTTTAAAGCAGCCTAGGATGCAAAGTAGTTTAGAGTCTTCATATGGCCTTCAAAGGAGTTCGTCCTCAATTCAGGCCCAGTTATTAGATGCATATGTGCAGTCACAGAACTCCAGCCGCAATCTCCTCGATTCTGGTGAGAGGCGCTATTCTAGTGTGCGCAATCTGCCTTCATCCGAGGCTTGGGATTATCAGCCGGCTACCATTCATGGTTATCAGTCTGCATCCTATCTTAACCGGGTTAGCAAAGACAGAAACTTCGATAACTTGAATGTTTCGATGGGGTCATCATCATTGAAATCCCCTTCCACCGATACAAATTACAGAGGTTCACTTGCACTTGCTTTGGGGAGAAAGTTGCATAATGGTGCAGGTATCGGCCAACCCCCAGGGTTCCAACACGTAGCTGTCTCTAGAAATTCTCAATTGCAATCTGAGAGGTCCTATTATGATTTTGGCTCATCAGTATCTGCAGATAATGCAGCCAGTTCCATTAATAACAAGAAGTACCACAGCTTACCAGACATTTCGGGATATGCCATCCCCCGCAGGACTGGTTATGTATCTGAGAAAAATGCTCCATGGAATGGGTCTGTTGGATATGGATCTTCTGCAAGTAAAACATATGAACCATCATTATATTCAAATTCTGGATCAAGAATAGGACATCCTTTGGCCTTTGATGAACTCTCTCCATCAAAAGTTTACCGGGAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATACTGGATCTCTATGGTGTAGACAACCTTTTGAGCAGTTCGGTGTTGCTGAAAAATTTAATAATGTTGCAATGGACGGTGTTGGAATTAGGCCTAATGCTGCTGCTCAAGAAACTACTTCTTTTGTAGATATAGAGGCGAAACTTCTTCAGTCGGTTAGACTTTGCATTGTGAAACTCTTAAAACTTGAAGGGTCTGATTGGTTATTTAGACAGAACGATGGGATTGATGAGGATCTGGTTGATCGCGTGGCTGCAAGGGAGAAATTTCTTTATGAAGTTGAGACTAGGGAGATGAATCAGGTCGCTCATATGGGCGAAACTCAATATTTTTCTTCTGATGGGAAACCTGGTTCTTCAATAAGGCATGATGATGCCAATTCCTCCAGTTTTTCAGTTTCCTCAGTTCCTAATTGTGGGGAGGGGTGTATTTGGAGATCAGACTTAATAATAAGCTTTGGAGTGTGGAGTATCCACCGTATTCTTGACCTCTCACTTATGGAAAGCCGGCCAGAACTTTGGGGGAAATACACCTATGTGCTCAATCGTCTCCAGGGCATTATTGATCCAGCTTTTTCCAAGCCTCGTAGTCCCATGGTCCCATGCTTTTGCCTTCAAGTTCCTGTGTCACATCAGCAAAAGTCAAGCCCCCCTCAGTCCAACGGAATGCTGCCACCGACTTCAAAACCAGGCCGAGGAAAATACACAACAGCATCGATGTTGCTTGAAGTGGTCAAGGATGTGGAGATTGCAATCTCTACCCGGAAAGGACGTAGTGGAACCGCGGCCGGTGATGTTGCTTTCCCAAAGGGAAAAGAAAATTTGGCGTCTGTTCTCAAACGATATAAGCGGAGGCTATCATACAAACCCGCTGCAATTCATTAA 3900 0.4362 MDAEASSTTNHLPGFLHRSLPAVVPTLLISIGYVDPGKWAAMVEGGARFGFGLMAFMLIFNFAAIFCQYISARIGIITGKDLAQICSDEYDTWTCMLLGIQAEISMIMLDLNMILGMAQGLNLIFGWDLFACVFLTATGAVFHLLLALLLDIKKAKIVGLYVTGFVLLSFVLGVLINQPGIPLSMNGVLTKLNGESAFVLMSLLGATLVPHNLYLHSSVVQWHQGPTDISKEALCHNHFLAILCFFSGLYLVNNVVMNASANEFYSTGLVLLTFQDALSPMEVLRSPIALFAFLLILFLANQATALTWSLGGEVVVHGFLRLDIPGWLHYATIRVIAVLPALYCVWSSGAEGIYQLVIVTQVLVALQLPSSVIPLFRVATSRSIMGVHKISQFVELLALVIFVGVLGLNIVFVVEMVFGSSEWVGDLRWNAGNGVSSSYLILYASAVASICFMLWLAVTPLRSASVQLEAQVWNWDTPETVSNQPVDGEESYLTGTKHHGVTSVQVKDPAPAPALTLERTLEYSDVTVPRFHHDIPETIMEPDLHVSAEKETQSTTSFPSSPKSLAKVSASTSESEAVSTVVDEVSDSRSEDTKCVKIETSAPVGKSVEFVGDSNAERDDDDDVDSWETEESSKVVSASAPSSTSDGPASFRSLSRKSDEGGNSIGSLSRLAGLGRAARRQLAAVLDEFWGQLYDFHGQATREAKAKKLDALLGGGIDSRSTGSLQQVDACGKEYSEYSASVGGRASDTSMNSGLYDSLKQPRMQSSLESSYGLQRSSSSIQAQLLDAYVQSQNSSRNLLDSGERRYSSVRNLPSSEAWDYQPATIHGYQSASYLNRVSKDRNFDNLNVSMGSSSLKSPSTDTNYRGSLALALGRKLHNGAGIGQPPGFQHVAVSRNSQLQSERSYYDFGSSVSADNAASSINNKKYHSLPDISGYAIPRRTGYVSEKNAPWNGSVGYGSSASKTYEPSLYSNSGSRIGHPLAFDELSPSKVYREALSSQLSSGFDTGSLWCRQPFEQFGVAEKFNNVAMDGVGIRPNAAAQETTSFVDIEAKLLQSVRLCIVKLLKLEGSDWLFRQNDGIDEDLVDRVAAREKFLYEVETREMNQVAHMGETQYFSSDGKPGSSIRHDDANSSSFSVSSVPNCGEGCIWRSDLIISFGVWSIHRILDLSLMESRPELWGKYTYVLNRLQGIIDPAFSKPRSPMVPCFCLQVPVSHQQKSSPPQSNGMLPPTSKPGRGKYTTASMLLEVVKDVEIAISTRKGRSGTAAGDVAFPKGKENLASVLKRYKRRLSYKPAAIH* 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1174 1299 MobiDBLite consensus disorder prediction 631 663 - -
Lan5g1174 1299 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 15 1198 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 MobiDBLite consensus disorder prediction 1216 1231 - -
Lan5g1174 1299 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 15 1198 - -
Lan5g1174 1299 MobiDBLite consensus disorder prediction 607 663 - -
Lan5g1174 1299 MobiDBLite consensus disorder prediction 1216 1236 - -
Lan5g1174 1299 PRINTS Natural resistance-associated macrophage protein signature 98 124 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 PRINTS Natural resistance-associated macrophage protein signature 200 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 PRINTS Natural resistance-associated macrophage protein signature 301 320 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 PRINTS Natural resistance-associated macrophage protein signature 329 346 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 MobiDBLite consensus disorder prediction 549 584 - -
Lan5g1174 1299 PIRSF EIN2 1 1299 IPR017187 GO:0009873
Lan5g1174 1299 Pfam Natural resistance-associated macrophage protein 39 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan5g1174 1299 MobiDBLite consensus disorder prediction 547 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1174 Lan-Chr5 25790960 25799253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1174 1 1299 Miscellaneous Gene Families AT5G03280 53.057 0.0 1263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1174 - K14513 cam:101495756 1835.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1174 5 25790960 25799253 Lan5g1174 5 25790960 25799253 ECH
Lan5g1174 5 25790960 25799253 Lan19g0242 19 2525756 2534595 LSH