Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1152 ATGGAGATTGATAAAGCTATTAGAGAGTGTGATGATCAAAGACTTCAAACCAAGTACAACAACGCCACTTATGTTATTCAGAGAGCTTTAGCTTTGTATTCTATTGAGGAGGTTGCTTTCAGTTTCAACGGTGGAAAGGATTCAACAGTTTTGTTGCACCTACTCAGGGCTGGAAATTTCTTGCATAAAAGGGGACAGGGTAATGCGAATGGGGATGTAAAAGATTTTTCAATACGCACAATATATTTTGAGAGTCCTTGTGCTTTTCCAGAAATAAACTCATTCACCTATGATATAGCTGCCACCTATGATTTGCAAATTGACACCATTCGCTTAGATTTCAAGTCTGGTTTGGAGGGTTTGCTAAAAGAGAATCCTATTCGAGCTATTTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCTCCTAGTTCACCTGGGTGGCCACCTTTCATGAGAGTGAATCCCATTTTAGATTGGTCATACAGAGACGTGTGGGCTTTCCTTTTAACTTGCAAGGTGAAGTATTGCAGCCTTTATGATCAAGGATATACTTCAATTGGGAGCATATATGACACGGTTCCGAACTCATTATTATCCATTAGCGATTCTTCCAATAAATTCAAGCCAGCTTATTTACTAGCCGATGGAAGATTAGAGAGGGCAGGAAGGGTTAAAAAGTTATCTTCTACTTCTGGACAACTCCGTGCTGATAGCAATGGCTTGACTGGCCTGGATTTGCATAAAAACAGCATGCTCACGGCATCAATTATTGTCGTGGGAGATGAAATTCTGTTTGGCACTGTTGAGGATCAGTTGGGGCCTTATTTGTGTAGGAAGCTGCATTCCGTTGGTTGGTCTGTTTTACAACTTTCTGTCGTACACAACAACATAGATTCTGTGGCCGAAGAGGTTGAGCAGTGGAAATCTACATGTGATACGGTATTTATTTATGGAGGTGTAGGTCCGCTGCATTCAGATGTTACCTTAGCAGGAATCGCAAAAGCTTTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTGAGGCATATTATTGGTGATCAGTGTACCGGTGACCGGAATGAGATGGCTCAATTGCCTGAAGGCATAACCGAATTATTGCATCATGACAAGTTGTCCATGCCCTTGATCAAGTGCCAAAATATAATAATTCTAAATGCGACGAATGTTTCGGAGCTGGAAAGTCAGTGGGACTGTTTGATTGAATTAACAAAATCTTGTGACATGCTTACATTGCTGGAACCATATGTATCAAAGCAAGTGACAACAAATCTATCAGATGTTGAAATTGCTCAACCACTATCCAAGCTTTGTCTTGAATTTCCAGACCTATATATCGGGTGTTACCGCAAAGCCAGATATGGATCTGTCATAGTAAGCTTCAAAGGAAAGGACCAAGCACGCCTCGAAACTGCGATAAAAGCGTTACACAACAAGTTTCAACCTGGTGCTTTCAATGAGATGAAGTAG 1518 0.4111 MEIDKAIRECDDQRLQTKYNNATYVIQRALALYSIEEVAFSFNGGKDSTVLLHLLRAGNFLHKRGQGNANGDVKDFSIRTIYFESPCAFPEINSFTYDIAATYDLQIDTIRLDFKSGLEGLLKENPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVKYCSLYDQGYTSIGSIYDTVPNSLLSISDSSNKFKPAYLLADGRLERAGRVKKLSSTSGQLRADSNGLTGLDLHKNSMLTASIIVVGDEILFGTVEDQLGPYLCRKLHSVGWSVLQLSVVHNNIDSVAEEVEQWKSTCDTVFIYGGVGPLHSDVTLAGIAKAFGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELLHHDKLSMPLIKCQNIIILNATNVSELESQWDCLIELTKSCDMLTLLEPYVSKQVTTNLSDVEIAQPLSKLCLEFPDLYIGCYRKARYGSVIVSFKGKDQARLETAIKALHNKFQPGAFNEMK* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1152 505 CDD PAPS_reductase 37 194 IPR002500 GO:0003824
Lan5g1152 505 PANTHER FAD SYNTHASE-LIKE 1 495 - -
Lan5g1152 505 SMART MoCF_biosynth_3a 262 395 IPR001453 -
Lan5g1152 505 Pfam Phosphoadenosine phosphosulfate reductase family 38 200 IPR002500 GO:0003824
Lan5g1152 505 Pfam Probable molybdopterin binding domain 263 358 IPR001453 -
Lan5g1152 505 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 1 495 - -
Lan5g1152 505 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 189 - -
Lan5g1152 505 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 258 384 IPR036425 -
Lan5g1152 505 Gene3D HUPs 2 234 IPR014729 -
Lan5g1152 505 Gene3D - 257 417 IPR036425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1152 Lan-Chr5 24803908 24810960 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1152 - - lja:Lj0g3v0206069.1 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1152 5 24803908 24810960 Lan5g1152 5 24803908 24810960 ECH
Lan5g1152 5 24803908 24810960 Lan19g0227 19 2315791 2326620 LSH