Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1142 ATGGCATCACAAACACCTCAAATCCACTTTGTCTTATTTCCATTTATAGCCCAAGGCCATATGATCCCTATGGTAGACATTGCAAAAATATTAGTGCAGCAAAATGTTGTTGTTACACTAGTCACAACACCACATAATGCTACTCGTTTCAAATCAACTTTAGCTTCTTATATTGAGTCTGGTTTTCAGCTTAGATTAGTTGAAGTTCCATTCCCATTTGAAGAAGCTGGGTTACCAAAAGGGTGTGAGAATCTTGATATGCTACCTTCACTTGGCACATCATTGAATCTCTTCACTGCATTGAGCTTTGTAAGGAAACCAGTGGAAACACTATTTGAAGAGTTAAACCCTCCACCAAGTTGCATAATCTCTGATATTTGTTTGCCATATACAATCCACATAGCTAAAAAATTCAACATTCCAAGGATTTCATTTGCAGGAGTAAGTTGTTTTTGTCAGTTATGTCTGCATAATTTACGAGTCCATAATGTTAGGGAGAGAATAAAAGATGAAAATGAGTACTTTGTTTTGCCTGGTATCGCTGACAAAATTGAAATGACCTTAGCCCAAACACCAGCACCAATGGATGAAACGTGGAAAGAGTTTGGTGATGAAGTCCTTGCAGCTGAAATTGATACTTATGGGACAATCATGAATACTTTTGAAGAGTTGGAGCCAGCTTATGCAAGGGAATACAAGAAGGTAAGAGGAGATAAAGTTTGGTGTATTGGTCCAGTTTCACTTAGTAATAAGGGTCACTTGGAAAAGGCTCAAAGAGGTAAAAATGGTTCCATTGATGAGTGGCAGCATCAAAAGTGGCTTGATTCTCAAAAACCAGGTAGTGTAATCTATGCATGTTTTGGAAGCCTATGTAATTTAACACCACCGCAATTCATAGAGCTAGGTTTAGCTTTAGAAGCATCAAAAAGACCCTTCATTTGGGTTATAAGGGAAAGTAGTACGTCAGAAGCATTGGAAAAGTGGATTAAGGAAGATGGATTTGAGGAAAGAACAAATGGGGTTGGCCTTGTAATTAAGGGCTGGGCTCCTCAACTACTGATATTAGCACACCCTTCAATTGGAGGGTTTATAACACACTGTGGTTGGAACTCAACCCTAGAAGCAATATCTGCTGGTGTACCAATGATTACATGGCCACTATTTGCAGATCAATTTTTGAATCAGAATCTAGTTGTGCATGTGTTGAAAGTTGGAGTTAAGGTTGGGGTAGAGACTCCTGTTACATGGGGTAATGAAGATAAAATTGGTGTGTTGGTGAAGAAAGAAGATGTTGAAAATGCCATAAAGGAGTTAATGGATGAGACTAGTGAACGTGAAGAAAGAAGAGAACGGGTTAGAGAGTTTGCAAAGATGGCTAAAAATGCTGTGGAAAAAGGAGGATCCTCTCATTCCAACGTGACCTTACTCATCCAAGATATCTTCCAAAATTCCAAGAAAGATATATGA 1467 0.3858 MASQTPQIHFVLFPFIAQGHMIPMVDIAKILVQQNVVVTLVTTPHNATRFKSTLASYIESGFQLRLVEVPFPFEEAGLPKGCENLDMLPSLGTSLNLFTALSFVRKPVETLFEELNPPPSCIISDICLPYTIHIAKKFNIPRISFAGVSCFCQLCLHNLRVHNVRERIKDENEYFVLPGIADKIEMTLAQTPAPMDETWKEFGDEVLAAEIDTYGTIMNTFEELEPAYAREYKKVRGDKVWCIGPVSLSNKGHLEKAQRGKNGSIDEWQHQKWLDSQKPGSVIYACFGSLCNLTPPQFIELGLALEASKRPFIWVIRESSTSEALEKWIKEDGFEERTNGVGLVIKGWAPQLLILAHPSIGGFITHCGWNSTLEAISAGVPMITWPLFADQFLNQNLVVHVLKVGVKVGVETPVTWGNEDKIGVLVKKEDVENAIKELMDETSEREERRERVREFAKMAKNAVEKGGSSHSNVTLLIQDIFQNSKKDI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1142 488 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Lan5g1142 488 Coils Coil 428 451 - -
Lan5g1142 488 Gene3D Glycogen Phosphorylase B; 271 464 - -
Lan5g1142 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 483 - -
Lan5g1142 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 281 446 IPR002213 GO:0008194
Lan5g1142 488 Gene3D Glycogen Phosphorylase B; 6 270 - -
Lan5g1142 488 PANTHER GLYCOSYLTRANSFERASE 7 483 - -
Lan5g1142 488 CDD GT1_Gtf-like 9 466 IPR002213 GO:0008194
Lan5g1142 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1142 Lan-Chr5 24734059 24735634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1142 6 482 Glycosyltransferase AT2G36780 55.833 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1142 K13496 - gmx:100777426 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1142 5 24734059 24735634 Lan5g1142 5 24734059 24735634 ECH
Lan9g0402 9 5868184 5869727 Lan5g1142 5 24734059 24735634 LSH