Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1141 ATGCCTTCTGCAATGACAATAAAAGATGATACAGCACCAGAAATCCAATATCAGAAAGGGGTGAAGCAGCTTTATGAGAATGGTGAAGTTCTTCAAAGGGTTCCTAAGAAGTACATATTTCCTCCTTCTGAACGATCTTCAACAAATAAGGAGGAACCAAATGTTGCCATGCAAAACTTTCAGCTACCCATCATTGATTTTGCTGATTTGATTGGTCCAAATAGGTCACATGTCCTTCAATCTTTAGCCAATGCTTGTGAAAAGTATGGATTTTTCCAGGTTGTGAATCATAGCATAGCAGATGAAGTTGTAAGAAGCATGTTAGATGTAAATGAGAGGTTCTTTGATCTTCCTTTGGAGGAAAGGGCTAAGTATATGACAACTGATATGCGTGCACCTGTTCGATATGGGACAAGTTTCAGCCAAACCAAAGACACTGTGTTCTGTTGGAGAGACTTCTTGAAATTACTGTCTCACCCTTTGTCTGATTTCATTCCCCTTTGGCCTTCTTCTCCTGTTGACTTTAGGGAAGTGGCGGCTACCTACGCAGAAGAAACCAAACACTTATTCCTTACTATAATGGAAGCTATTTTAGAGAGCCTAGGAATTAAGGAATCCAACAAAGAAGAAGAGACAGAAGGAAAAGACAATATTCTTAAAGACTTTGAGAATTGTAGCCATATGATGGTGGCAAATTTCTACCCACCATGTCCTGAACCAAACCTAACCCTTGGAATGCCGCCTCATTCTGATTATGGGTTCCTCACACTTCTCTTACAAGATGAGGTTGAGGGCTTGCAAATTCAATTCCAAGGAAAATGGGTTACTATTCAACCTATTCCTAATGCTTTCATTGTCAATGTTGGTGATCACTTGGAGATATTTAGCAATGGAAAATACAAGAGCGTATTACATAGGGTGTTGGTGAATGAAATGAAGAGTAGGGTATCAGTGACTTCATTACATAGTCTTCCCTTCAATTGCTCTATAAGACCGTCACCAAAACTCATTAATGAAGAGAATCCCAAGCGTTAG 1035 0.3952 MPSAMTIKDDTAPEIQYQKGVKQLYENGEVLQRVPKKYIFPPSERSSTNKEEPNVAMQNFQLPIIDFADLIGPNRSHVLQSLANACEKYGFFQVVNHSIADEVVRSMLDVNERFFDLPLEERAKYMTTDMRAPVRYGTSFSQTKDTVFCWRDFLKLLSHPLSDFIPLWPSSPVDFREVAATYAEETKHLFLTIMEAILESLGIKESNKEEETEGKDNILKDFENCSHMMVANFYPPCPEPNLTLGMPPHSDYGFLTLLLQDEVEGLQIQFQGKWVTIQPIPNAFIVNVGDHLEIFSNGKYKSVLHRVLVNEMKSRVSVTSLHSLPFNCSIRPSPKLINEENPKR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1141 344 SUPERFAMILY Clavaminate synthase-like 20 343 - -
Lan5g1141 344 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 163 IPR026992 -
Lan5g1141 344 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 324 IPR005123 -
Lan5g1141 344 Pfam 2OG-Fe(II) oxygenase superfamily 226 322 IPR044861 -
Lan5g1141 344 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 11 344 - -
Lan5g1141 344 PRINTS Isopenicillin N synthase signature 82 99 - -
Lan5g1141 344 PRINTS Isopenicillin N synthase signature 249 270 - -
Lan5g1141 344 PRINTS Isopenicillin N synthase signature 284 310 - -
Lan5g1141 344 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 344 - -
Lan5g1141 344 Gene3D - 12 344 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1141 Lan-Chr5 24724886 24729038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1141 56 344 Glycosyltransferase AT5G59530 33.993 2.21e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1141 - - lang:109348354 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1141 5 24724886 24729038 Lan5g1141 5 24724886 24729038 ECH