Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1138 ATGAAGCTCCTTGTTAAGGAGGATCTTGTTGCAAACCAAACCGGAACCGCAAAAATAATTCCAGAAGAATCCGATGACTTATGGCTCCTTTACAATATTATCTCTCAAAACGACGTCGTTTCAGCCGAGACAACCCGAAAGGTTCACCTTGAATCCTCGAACAAGAGCACGACTGCATCACGTGTCAAACTCACCCTCCACCTTAAAGTCACGTGCCGTGACTTCCATAAAGACTCTTCAACCCTAAGAATTCAAGGACGTAGCCTTGATGCTAACCCTTATGTCCCTCAAGGGTCGTTCCACACGTTTACCCTTGAGTTGAATAAACCCTTTGAGATAAGGAAAAAGGTTTGGGATTGTGATGCTGTTGAAGCATTGCGTGAGAGTGCTGAGAAAGTTTCTTGTGCTGAAGGTGACCTTGTTGTTGTTGTCATGCAACAAAAACATGCAGAGATATATTTGCTTGGGAAAGGGGTTACCACTTTGTGTTCTAAGATTGAAGGTTCTTCTTTGACAAGTGGAAGAAAAGCTTCTTTCAAAGGGCCAGGGAATGCATTTTTCCGTGAAGTCTTTGGCTCTATTACAAAGCACGTGGATTTCAAACTTGTGAAAAGTGTAGTCATTGCAAGTGATGGATCTACAAAAGAAGAATTTCGTAGGTTCCTTCTCTTAGAAGCAAAAAGGTTAAGAATGAAATCCATAGAAGAAAACAAGTCAAGAATAGTAGTAGTAGGATTAGAGTGCAATAACAACAAGGGCAATGATCATTTGAAAGAGGTTTTGGGTGACAGCACAGTGATGAATTCAATCAAAGATAGCAAAGTTGGCATAGAAATAAGGGCTATGAGGGAATTATGGGACATGGTGTGTAACAATTCTGATCGTGCATGTTATGGTCCTAAGAGTGTAGAAAGTGCAGAAAAGATGAAAGCTATTGAGACCCTTTTGATCAATGATGATGTTTATAGGAGTAATGAGATTGGAACAAGGAAAAAGTATGAAAATTTGGTGAAATCAGTGAAAGAAAGTGGAGGGAAGGTTTTGGTTTATTCCTCCATGCATGTGTTGGCTCAGCAGCTTCAACAACTCACAGGTGTTGCAGCTATTCTTAGGTTTCCATTGCCTGATCTTGAAGAAATGGATGTTTAA 1149 0.4038 MKLLVKEDLVANQTGTAKIIPEESDDLWLLYNIISQNDVVSAETTRKVHLESSNKSTTASRVKLTLHLKVTCRDFHKDSSTLRIQGRSLDANPYVPQGSFHTFTLELNKPFEIRKKVWDCDAVEALRESAEKVSCAEGDLVVVVMQQKHAEIYLLGKGVTTLCSKIEGSSLTSGRKASFKGPGNAFFREVFGSITKHVDFKLVKSVVIASDGSTKEEFRRFLLLEAKRLRMKSIEENKSRIVVVGLECNNNKGNDHLKEVLGDSTVMNSIKDSKVGIEIRAMRELWDMVCNNSDRACYGPKSVESAEKMKAIETLLINDDVYRSNEIGTRKKYENLVKSVKESGGKVLVYSSMHVLAQQLQQLTGVAAILRFPLPDLEEMDV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1138 382 TIGRFAM pelota: mRNA surveillance protein pelota 5 374 IPR004405 GO:0070481|GO:0070966|GO:0071025
Lan5g1138 382 Gene3D - 272 382 IPR029064 -
Lan5g1138 382 SMART eRF1_1_2 1 131 IPR005140 -
Lan5g1138 382 SUPERFAMILY Translational machinery components 138 274 - -
Lan5g1138 382 PANTHER PELOTA 1 381 IPR004405 GO:0070481|GO:0070966|GO:0071025
Lan5g1138 382 Pfam eRF1 domain 3 278 374 IPR005142 -
Lan5g1138 382 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 381 - -
Lan5g1138 382 SUPERFAMILY Dom34/Pelota N-terminal domain-like 5 129 IPR038069 -
Lan5g1138 382 Pfam eRF1 domain 2 141 271 IPR005141 -
Lan5g1138 382 SUPERFAMILY L30e-like 278 379 IPR029064 -
Lan5g1138 382 Pfam eRF1 domain 1 1 129 IPR005140 -
Lan5g1138 382 Gene3D eRF1 domain 2 138 270 IPR042226 -
Lan5g1138 382 Gene3D Pelota, domain A 1 132 IPR038069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1138 Lan-Chr5 24709645 24711971 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1138 K06965 - gmx:100803618 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1138 5 24709645 24711971 Lan5g1138 5 24709645 24711971 ECH