Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1127 ATGAGAGGCATAGTATCTTGTTATAATGAACATGCCATAAGAGTTTCTGATTCATATTGTTCAAGAAATTCTTCAACTTCAAACCAACCTTATATATGTCCAAAACAAAACCCTTCAACCCCACACTCAATTACATGCATATACAAACTCAACCTTATTTCACATCAAACACAATTTCTCATCACATTAACTTGGACCAAGAAACTCATACACCAAGGTTTCACCATAAATATTCATCCTTATGATTCTGATTCAAGAAGTTCTCTTCTATTGCAAAAGAACAAAGGCACTGAAACATTTCAAGTCTACAACTTTGAAGTTCAACTCATTTGGGATATCTCTGATGCTATATATTATGAAGGACCAGAACCAGTTAAGGGGTTTTACATCATCGTTTTGATTAATTCTGAATTGGGTTTACTCCTTGGAGACAAAGAAGAAGAATGGTTGAAAAACATGAAGATAGTAAATAATTCTTCAATGGTTTCTAGGAGTGAGTTATTCTTTAATAGCACTAATGTTTATGCAACAAAGGCTAAGTTTTGTGAGACAGGAATTTCTCATGATATAGTTATAAAGTGTGGTGTTGTTGATGAAGGGTCAAAGAGTTATAATCATTATCATAATCATAGTTATAGTTATAATCATAATAATTATGGGTTATGTGTATATATGGACAAGAAGACAATTTTTGAGGTGAAAAGGTTAAGGTGGAATTTTCGTGGAAACCAAACAATTTTTGTAGATGGTTTGGTTGTGGATTTTATGTGGGATGTTCATGATTGGATTTTCAATCAGAACAAAGGTTCTATTGTGTTCATGTTTAGGACAAGAAGTGGCTTGGACCATAGGTTATGGTTGGAAGAGAAGAATTTGAAGACAAACAAGGAATTTCAGGACAGAGGAATTGGGCTTTCTTTGTTGATATGTGCTTGTAAGAACCCTGACTAA 951 0.3333 MRGIVSCYNEHAIRVSDSYCSRNSSTSNQPYICPKQNPSTPHSITCIYKLNLISHQTQFLITLTWTKKLIHQGFTINIHPYDSDSRSSLLLQKNKGTETFQVYNFEVQLIWDISDAIYYEGPEPVKGFYIIVLINSELGLLLGDKEEEWLKNMKIVNNSSMVSRSELFFNSTNVYATKAKFCETGISHDIVIKCGVVDEGSKSYNHYHNHSYSYNHNNYGLCVYMDKKTIFEVKRLRWNFRGNQTIFVDGLVVDFMWDVHDWIFNQNKGSIVFMFRTRSGLDHRLWLEEKNLKTNKEFQDRGIGLSLLICACKNPD* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1127 316 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 314 - -
Lan5g1127 316 Pfam Plant protein of unknown function (DUF868) 40 313 IPR008586 -
Lan5g1127 316 PANTHER EXPRESSED PROTEIN 1 314 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1127 Lan-Chr5 24628607 24630106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1127 1 314 EF-hand Containing Proteins AT5G28150 31.889 2.01e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1127 - - pvu:PHAVU_001G186900g 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1127 5 24628607 24630106 Lan5g1127 5 24628607 24630106 ECH
Lan9g0383 9 5671843 5673072 Lan5g1127 5 24628607 24630106 LSH