Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1122 ATGCATGATGAAGATGATAGAAAGGTTGTGCATGATGAAGTTGATATTACCAACTTAGGGTTTCAAGACAAGAAGCTTCTAATGGAAAACATGCTCAAGTTTGTGGAGAAGGACAATGAAAAGTTCCTAGGAAAACTAAGAGACCGAGTTGACAGAGTGGGGATTAAAATTCCAAAAATTGAAGTCCGGTATGAAAATTTATCTGTGGAAGGAGATGTGTACATTGGGAGAAGAGCACTTCCTACATTGCTTAATGCTACTCTGAACATTTTTGAGAGTATTATGGAGATGTTTCGTCTTACATCTTCCAAGAAAACAGAAATTCAGATTCTTAAAAATATCAGTGGAATCATCAAGCCATCAAGGATGACTTTACTTTTGGGTCCACCAAGCTCAGGGAAAACAACATTACTTATGGCACTTGCAGGGAAACTTGACGAGCATTTAAGGTGTTATGGGAGAATCACTTACTGTGGGCATGAGCTAAATGAATTTGTTCCTCAAAAAACATGTGCTTATATAAGTCAACATGACCTTCACCTTGGACAAATGACAGTGAAAGAAACATTAGATTTTTCAGGAAGATGTCTTGGTGTTGGAACTAGATATCAAATGTTGTCTGAACTTTCAACAAGAGAGAGACAAGAAGAAATTAACCCTGACCCTGAGATTGATGCATTCATGAAAGCTACTGCAATATCAGGCCAAAAAACTAATTTGATAACAGATTATATTCTCAAGATACTTGGATTGGATATATGTGAGGACATTTTGGTTGGTGATAACATGAGCAGAGGTATCTCTGGTGGACAAAAGAAGCGCCTCACCACAGGTGAAATGTTGGTTGGACCAGCAAAGGCACTCTTTATGGATGAAATATCAACAGGGTTGGACAGTTCCACCACATTTCAGATATGCAAGTTCATGAGACAAATGGTTCATAACTTGGATATAACTATGGTGATTTCTCTTTTACAACCAGCTCCAGAAACATTTGTTCTCTTTGATGACATTATACTACTTTCAGAAGGTCAAATTGTATACCAAGGTCCGCGCGAAAATGTGCTAGAGTTTTTCGAACAGACAGGTTTCAAATGTCCTAAGAGAAAAGGAGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGACCAACAACAATATTGGTTTAGAGAAAATGAACCATACAGATATGTTTCGGTTCCCGAATTTGTAAATGTGTTTAGTTCATTCAAAATAGGAGAGCAACTAGTGAATGAGTTGAGGGTACCTTATGACAAAGGCCTAACCCACCCAACTGCATTAGTGAAAGACAAGTATGGTTTATCAAACCGGGAACTACTTCAGGCATGCTTTTCAAGAGAATGGTTGCTTATGAAGCGCAGCGCGTTTGTTTACATATTCAAGGCAATACAGACAACAATAATGGCAATTTTAGGCTTCACCGTGTTCCTTAGAACCGAAATGGCAGCAGAAAGTTTTCAAGATGGACAAAAATTCTTCGGAGCACTGTTTTTCACTGTAATGAATATGATGTTTAACGGCATGGTCGAACAATCTAAAATTATTATCTCGCTTCCTATCTTTTACAAACAAAGGGACCTTATGTTTTTCCCTGCATGGGCATTTGCACTACCTATATGGATTCTCAGGATCCCTATCTCCTTATTGGATTCAGGGATATGGATCATCCTTACATACTATACAATTGGATTTGCTCCTTCTGCTAGCAGATTCTTCAAACACTTCTTGGCATTGTTTAGCATTCATCAGATGGCTTTGTCACTTTTTCAGTTCATTGGTGCAGCTAGTAGAACACTAGTTGTTGCTAATATAGTCTCTTTCTTAGCCTTTCAAGTAATATTTATACTCGGAGGTTTTATAATCGCCAAAGATGATATTAAGCCATGGTTGATGTGGGGATATTATGCTTCTCCTATGATGTATGGTCAGAATGCCATCGTAATAAACGAATTTTTAGACGATAGATGGAGTAAACCAAATACAGATCCTAGAATTGATGCAACTACAATTGGAAAAGCACTTCTCAAATCTAGAGGCTTCTTTACAGAAGATTATTGGTATTGGATATGCATTGGAGTCATGCTTGGGTTTGCAGTTATTTTCAATCTTCTCTTTATAGTTGCGCTGACTTATTTGAACCCTTTGGGTGATTCAAAAGCATTCCTCTTGGATGAAGATGATAAGAAGAATAAAAAATCAGCCTCTAAACAAAATGTTACTAAAGGGAAAGGTATAGACACGCCAATGAAAGATTTGTCAGAAATTGCTTCTTCTTCTGATCGAAAACCAAGAACAGGAATTGTTCTACCATTTCAACCTCTTTCACTTGCATTCAGTAATGTCAGTTACCATGTAGATATGCCTGCTGAAATGAAGAGTCAAGGAATCCACGAAAATCGACTTCAACTGCTTAAAGATGTTAGTGGTGCTTTCAGACCAGGTGTATTGACAGCACTTATGGGTGTTAGTGGTGCTGGGAAGACAACACTCATGGATGTATTAGCGGGAAGAAAAACAGGTGGATACATCGAAGGAAGTATTAGAATCTCGGGCTATCCAAAGAATCAAGCAACATTTGCTCGAGTTAGTGGTTACTGTGAACAGAATGACATTCATTCTCCACATGTTACTGTCTACGAATCGCTATTATTCTCAGCTTGGCTCCGTCTTCCTTCAGATGTAACGACACAAACGCGAAAGATGTTTGTTGAAGAAGTTATGGAATTGTTGGAACTTAAACCTATTAGAGATACTTTAGTGGGTCTTCCGGTCACAAATGGTTTGTCAACAGAACAAAGGAAAAGGCTTACTATTGCCGTAGAGCTGGTTGCGAACCCGTCAATCATATTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCCGCAATTGTTATGCGAGCAGTGAGGAATACCGTGGACACGGGGAGAACAGTTGTGTGCACAATTCACCAGCCAAGCATAGACATTTTCGAAAGTTTTAACGAGTTAATATTGATGAAAGTGGGAGGTAAAATCACCTATGCCGGGCCTCTTGGTCATCATTCACAAAAGCTTATAGAATACTTTGAAGCTATTGCAGGGGTTCCAAAAATCACGGACGGTTATAATCCTGCTACATGGATGCTTGAGATTAGTTCTCCGTCGATGGAGGCTCAACTTGATGTCGATTTTGCAGTGATCTATGCTAACTCCATCCTCTACCAGAGGAATCAAGAACTAATCAAGGAGCTTAGTACTCCGGCACAAAATTCCAAGGACTTATTCTTCTCGACGAAATACTCCCGATCATTTTATGTACAATGGAAGGCTTGTTTCTGGAAACTACATTGGTCCTACTGGAGAAATCCTCAGTATAATTTCACCCGGTTTTGCATAGCAGTAGTTATAGGAGTACTTTTTGGTGTGATCTTTTGGAACAAAGGCGCAAACATAGAGAAAAAACAAGATATATTAAACATGTTCGGAGGATTGTATGTTGCTGTGACTTTCCTTGGATACACCAATGCTTCAGGAGTGCAACCAGTTATTGATATCGAAAGAACCGTCTTATATCGTGAAAAGGCGGCAGGGATGTATTCAGCACTACCCTACGCAATTAGTCAGGTAGCAATTGAGACAATTTACACCTTAATCCAAACAGCTATATACTGTGTTATCCTTTACTCAATGGTTGGATTAGAATGGAAAGCAGAGAAATTCTTTTGGTTCTACTACTATATAACTTTGTGTTTCATGTACTATACATTGTATGGTATGATGGCTATTGCAATAACTCCTGGTTACCAAGTTGCTGTTATTTCTATGTCCTTCTTCATGAACTTTTGGAACTTGTTCTCTGGCTTTACTATTCCAATAACACAACTACCTATATGGTGGAGATGGTACTATTGGATTTGTCCTATTTCTTGGACATTCAATGGCATTATTACATCTCAATATGGTGACTTAAATTCAGAAATAGTAATACCAGGAGCTGAAAATATGACAGTGAAGAATTTCCTTAAAGAGATGTTTGGTTTTCACCATGACTTTCTTCCAGTGATTGCTGTAGTTCATGTAGGTTGGGTTCTTCTCTTCTTGTTTGGGTTTGCCTTTGGCATTAAATTCCTTAACTTCCAGAAAAGATAG 4158 0.3846 MHDEDDRKVVHDEVDITNLGFQDKKLLMENMLKFVEKDNEKFLGKLRDRVDRVGIKIPKIEVRYENLSVEGDVYIGRRALPTLLNATLNIFESIMEMFRLTSSKKTEIQILKNISGIIKPSRMTLLLGPPSSGKTTLLMALAGKLDEHLRCYGRITYCGHELNEFVPQKTCAYISQHDLHLGQMTVKETLDFSGRCLGVGTRYQMLSELSTRERQEEINPDPEIDAFMKATAISGQKTNLITDYILKILGLDICEDILVGDNMSRGISGGQKKRLTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHNLDITMVISLLQPAPETFVLFDDIILLSEGQIVYQGPRENVLEFFEQTGFKCPKRKGVADFLQEVTSKKDQQQYWFRENEPYRYVSVPEFVNVFSSFKIGEQLVNELRVPYDKGLTHPTALVKDKYGLSNRELLQACFSREWLLMKRSAFVYIFKAIQTTIMAILGFTVFLRTEMAAESFQDGQKFFGALFFTVMNMMFNGMVEQSKIIISLPIFYKQRDLMFFPAWAFALPIWILRIPISLLDSGIWIILTYYTIGFAPSASRFFKHFLALFSIHQMALSLFQFIGAASRTLVVANIVSFLAFQVIFILGGFIIAKDDIKPWLMWGYYASPMMYGQNAIVINEFLDDRWSKPNTDPRIDATTIGKALLKSRGFFTEDYWYWICIGVMLGFAVIFNLLFIVALTYLNPLGDSKAFLLDEDDKKNKKSASKQNVTKGKGIDTPMKDLSEIASSSDRKPRTGIVLPFQPLSLAFSNVSYHVDMPAEMKSQGIHENRLQLLKDVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSIRISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVTTQTRKMFVEEVMELLELKPIRDTLVGLPVTNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFESFNELILMKVGGKITYAGPLGHHSQKLIEYFEAIAGVPKITDGYNPATWMLEISSPSMEAQLDVDFAVIYANSILYQRNQELIKELSTPAQNSKDLFFSTKYSRSFYVQWKACFWKLHWSYWRNPQYNFTRFCIAVVIGVLFGVIFWNKGANIEKKQDILNMFGGLYVAVTFLGYTNASGVQPVIDIERTVLYREKAAGMYSALPYAISQVAIETIYTLIQTAIYCVILYSMVGLEWKAEKFFWFYYYITLCFMYYTLYGMMAIAITPGYQVAVISMSFFMNFWNLFSGFTIPITQLPIWWRWYYWICPISWTFNGIITSQYGDLNSEIVIPGAENMTVKNFLKEMFGFHHDFLPVIAVVHVGWVLLFLFGFAFGIKFLNFQKR* 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1122 1385 Pfam ABC-transporter N-terminal 36 86 IPR029481 -
Lan5g1122 1385 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 95 368 IPR003439 GO:0005524
Lan5g1122 1385 Pfam ABC-2 type transporter 447 659 IPR013525 GO:0016020|GO:0140359
Lan5g1122 1385 Pfam ABC-2 type transporter 1110 1322 IPR013525 GO:0016020|GO:0140359
Lan5g1122 1385 PANTHER ATP-BINDING CASSETTE TRANSPORTER 4 1385 - -
Lan5g1122 1385 Pfam ABC transporter 812 964 IPR003439 GO:0005524
Lan5g1122 1385 Pfam ABC transporter 111 293 IPR003439 GO:0005524
Lan5g1122 1385 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 784 1037 IPR003439 GO:0005524
Lan5g1122 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 367 IPR027417 -
Lan5g1122 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 806 1023 IPR027417 -
Lan5g1122 1385 CDD ABCG_PDR_domain2 781 1019 IPR034003 -
Lan5g1122 1385 Pfam ABC-2 type transporter 326 378 IPR043926 GO:0140359
Lan5g1122 1385 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 4 1385 - -
Lan5g1122 1385 Gene3D - 97 399 IPR027417 -
Lan5g1122 1385 Pfam Plant PDR ABC transporter associated 664 729 IPR013581 -
Lan5g1122 1385 SMART AAA_5 120 344 IPR003593 -
Lan5g1122 1385 SMART AAA_5 821 1013 IPR003593 -
Lan5g1122 1385 Gene3D - 784 1034 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1122 Lan-Chr5 24565699 24576225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1122 K08711 - gmx:100786482 2162.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1122 5 24565699 24576225 Lan5g1122 5 24565699 24576225 ECH