Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1109 ATGAGAATATCATGGTTTACAATTTATCCAACCCCTGCAACAGTTCAATATGGTCTAACCCCTTCAGCTGATAGCTTCAATGCCACTGGAGTGGTCGATTCATATCGTTATATGCTCTATTACTCTGGACCAGTTCATAATGTGATAATAGGTCCACTCAACCCTAATACAGTTTACTATTATCGTATGGGTAAATCTCCTAAAGTATACACTCTGAAGACTCCACCTTCTCAATTTCCTATCAAGTTTGCAGTTGTTGGAGATCTTGGACAAACAGAATACACCAAAACAACTTTGGAGCATATATTAACACCAGGCTATGACATGCTTCTATTAGCTGGGGACTTATCTTATGCAGACACCATTCAAGAACAATGGGAAACATTTGGTCGTTTTATTGAACCATTAGCAAGTCAAAGACCATGGATGGTAACTACAGGAGACCATGATGTTGAGAAGATTACATTGTTCCATAGAAGGTCATTCACAGCTTACAATACAAGGTGGCTAATGCCATTTGATTTGAGTGGATCAAAATCTAACCAATACTATTCTTTTGAGGTGGCTGGTGTTCATATTATTATGTTAGGATCATACACTGATTTTGACAGTAAGTCTAATCAATATAAATGGCTTCAAGGGGACTTGAACAATGTGGATAGGAAAAAAACTCCTTGGCTTGTGGTCATGTTTCATGCACCTTGGTATAACTCCAACACTCTTCATCAGGGTGAATATGCATCAGTTGAAATGAAGGCTGTCTTGGAAGATATGCTTTATAAAGCTCATGTTGATCTTGTTATTGCGGCGCATATTCATGCCTATGAGCGTTTTACAAGGGTTTATAAAGAAAAAGCTAACAAGTGTGGTCCAGTGTATATCACTATTGGGGATGGAGGCAACCGTGACCACTTTAATCCATACTTCATGGATCCCCCACCAGAAATATCATTCTTCAGGGAGCGTAGCTTTGGACATGGGACATTGGAGGTGACTAATGCAACACATGCACTTTGGACTTGGATTAGGAATCATGATGATAAACCAGTTATTAGTGAGTCTCTATGGTTAACAAGCCTCTCCTCAGATTCTGCTTGTAATGGTAATTAA 1110 0.3901 MRISWFTIYPTPATVQYGLTPSADSFNATGVVDSYRYMLYYSGPVHNVIIGPLNPNTVYYYRMGKSPKVYTLKTPPSQFPIKFAVVGDLGQTEYTKTTLEHILTPGYDMLLLAGDLSYADTIQEQWETFGRFIEPLASQRPWMVTTGDHDVEKITLFHRRSFTAYNTRWLMPFDLSGSKSNQYYSFEVAGVHIIMLGSYTDFDSKSNQYKWLQGDLNNVDRKKTPWLVVMFHAPWYNSNTLHQGEYASVEMKAVLEDMLYKAHVDLVIAAHIHAYERFTRVYKEKANKCGPVYITIGDGGNRDHFNPYFMDPPPEISFFRERSFGHGTLEVTNATHALWTWIRNHDDKPVISESLWLTSLSSDSACNGN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1109 369 Pfam Calcineurin-like phosphoesterase 82 275 IPR004843 GO:0016787
Lan5g1109 369 Pfam Purple acid Phosphatase, N-terminal domain 1 73 IPR015914 GO:0003993|GO:0046872
Lan5g1109 369 CDD MPP_PAPs 77 359 IPR041792 -
Lan5g1109 369 PANTHER PURPLE ACID PHOSPHATASE 1 367 - -
Lan5g1109 369 SUPERFAMILY Metallo-dependent phosphatases 80 353 IPR029052 -
Lan5g1109 369 Gene3D - 1 77 - -
Lan5g1109 369 Pfam Iron/zinc purple acid phosphatase-like protein C 290 349 IPR025733 -
Lan5g1109 369 SUPERFAMILY Purple acid phosphatase, N-terminal domain 1 76 IPR008963 GO:0003993|GO:0046872
Lan5g1109 369 Gene3D - 78 365 IPR029052 -
Lan5g1109 369 PANTHER ACID PHOSPHATASE RELATED 1 367 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1109 Lan-Chr5 24350818 24353130 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1109 43 348 Miscellaneous Gene Families AT1G13900 27.273 4.81e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1109 K22390 - gmx:100794764 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0375 9 5598883 5603932 Lan5g1109 5 24350818 24353130 LSH