Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1107 ATGGGGGTTCATATGCGTGTTCGAGGAATCATTTCCTTGCTCTTTCTAATTTCTGTGTTATTGGAATTCAATGTTGTTTATTCCTACACTCGTCCACCTCCTCGTAAAAACATTTTCACCCCATTGTCTGATGATGATGATGCCTCATCCCCACAACAGGTACGTGTATCTCAAGTGGGGAAAGATAGAATGAGAATATCATGGTTTACAATTTATCCAACCCCTGCAACAGTTCAATATGGTCTAACCCCTTCGGCTAATAGCTTCAATGCCACTGGAGTGATCGATTCATATCATTATATGTTCTATTACTCTGGACCAGTTCATAATGTGATAGTAGGTCCACTCAAACCTAATACAGTTTATTACTATCGTATGGGTGATTGTACTAAAGTATACAATTTCAAAACTCCACCATCTCATTTTCCTATCAAGTTTGCAGTTGTTGGAGATCTTGGACAAACAGAATACACCAAAACAACTTTGCAGCATATATCTGACCCAGGCTATGATATGCTTCTATTAGCTGGGGACTTATCTTATGCAGATACTATTCAAGAACAATGGGAATCATTTGGCCGTTTAATTGAACCATTAGCAAGTCAAAGACCATGGATGGTAACTACAGGAGACCATGATATTGAGAAGATTACATTCTTTCATAGAAGGTCATTCACAGCTTACAATACAAGGTGGCTAATGCCATTTAATGAGAGTGGATCAAACTCTAACCAATACTATTCTTTTGAAGTAGCTGGTGTTCATATTATTATGTTAGGATCATACACTGATTTTGACAGTAATTCTAATCAATATAAATGGCTTCAAGGGGACTTGAACAAGGTGGATAGGAAAAATACTCCTTGGCTTGTGGTCATGTTTCATGCACCTTGGTATAACTCCAACACTCTTCATCAGGGTGAATATGCATCAGTTGAAATGAAGGCTATCTTGGAAGATATGCTTTATAAAGCTCGGGTTGATATTGTTATTTCAGCTCATATTCATGCCTATGAGCGTTTTACAAGGGTTTATAAAGAAAAAGCTAACAAGTGTGGTCCAGTGTATATCACTATAGGGGATGGAGGCAACCGTGACGACTTCAATCCATACTTCATGGATCCCCCACCAGATATATCATTCTTCAGGGAGCGAAGCTTTGGACATGGGACATTGGAGGTGACTAATGCAACACATGCACTTTGGACTTGGATTAGGAATCATGATGATAAACCAGTTACTACTGAATCTCTATGGTTAACAAGCCTCTCCTCAGATTCTGCTTGTAATGGTAATTAA 1299 0.3857 MGVHMRVRGIISLLFLISVLLEFNVVYSYTRPPPRKNIFTPLSDDDDASSPQQVRVSQVGKDRMRISWFTIYPTPATVQYGLTPSANSFNATGVIDSYHYMFYYSGPVHNVIVGPLKPNTVYYYRMGDCTKVYNFKTPPSHFPIKFAVVGDLGQTEYTKTTLQHISDPGYDMLLLAGDLSYADTIQEQWESFGRLIEPLASQRPWMVTTGDHDIEKITFFHRRSFTAYNTRWLMPFNESGSNSNQYYSFEVAGVHIIMLGSYTDFDSNSNQYKWLQGDLNKVDRKNTPWLVVMFHAPWYNSNTLHQGEYASVEMKAILEDMLYKARVDIVISAHIHAYERFTRVYKEKANKCGPVYITIGDGGNRDDFNPYFMDPPPDISFFRERSFGHGTLEVTNATHALWTWIRNHDDKPVTTESLWLTSLSSDSACNGN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1107 432 Gene3D - 50 140 - -
Lan5g1107 432 PANTHER PURPLE ACID PHOSPHATASE 17 430 - -
Lan5g1107 432 CDD MPP_PAPs 140 422 IPR041792 -
Lan5g1107 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 47 139 IPR008963 GO:0003993|GO:0046872
Lan5g1107 432 Pfam Calcineurin-like phosphoesterase 145 338 IPR004843 GO:0016787
Lan5g1107 432 PANTHER ACID PHOSPHATASE RELATED 17 430 IPR039331 GO:0003993
Lan5g1107 432 Pfam Purple acid Phosphatase, N-terminal domain 51 137 IPR015914 GO:0003993|GO:0046872
Lan5g1107 432 Gene3D - 141 428 IPR029052 -
Lan5g1107 432 Pfam Iron/zinc purple acid phosphatase-like protein C 353 410 IPR025733 -
Lan5g1107 432 SUPERFAMILY Metallo-dependent phosphatases 143 418 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1107 Lan-Chr5 24324611 24328035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1107 172 411 Miscellaneous Gene Families AT1G13900 28.881 1.07e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1107 K22390 - gmx:100790228 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1107 5 24324611 24328035 Lan5g1107 5 24324611 24328035 ECH